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Cluster Gauss-Newton method for a quick approximation of profile likelihood: With application to physiologically-based pharmacokinetic models | |
2023-10-01 | |
发表期刊 | CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY (IF:3.1[JCR-2023],3.6[5-Year]) |
ISSN | 2163-8306 |
发表状态 | 已发表 |
DOI | 10.1002/psp4.13055 |
摘要 | Physiologically-based pharmacokinetic (PBPK) models can be challenging to work with because they can have too many parameters to identify from observable data. The profile likelihood method can help solve this issue by determining parameter identifiability and confidence intervals, but it involves repetitive parameter optimizations that can be time-consuming. The Cluster Gauss-Newton method (CGNM) is a parameter estimation method that efficiently searches through a wide range of parameter space. In this study, we propose a method that approximates the profile likelihood by reusing intermediate computation results from CGNM, allowing us to obtain the upper bounds of the profile likelihood without conducting additional model evaluation. This method allows us to quickly draw approximate profile likelihoods for all unknown parameters. Additionally, the same approach can be used to draw two-dimensional profile likelihoods for all parameter combinations within seconds. We demonstrate the effectiveness of this method on three PBPK models. |
URL | 查看原文 |
收录类别 | SCI |
语种 | 英语 |
WOS研究方向 | Pharmacology & Pharmacy |
WOS类目 | Pharmacology & Pharmacy |
WOS记录号 | WOS:001085409500001 |
出版者 | WILEY |
引用统计 | 正在获取...
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文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/346492 |
专题 | iHuman研究所 iHuman研究所_特聘教授组_Yuichi Sugiyama组 |
通讯作者 | Sugiyama, Yuichi |
作者单位 | 1.AstraZeneca, BioPharmaceut R&D, Cardiovasc Renal & Metab CVRM, Drug Metab & Pharmacokinet Res & Early Dev, Gothenburg, Sweden 2.Josai Int Univ, Lab Quantitat Syst Pharmacokinet Pharmacodynam, 2-3-11 Hirakawa Cho,Chiyoda Ku, Tokyo 1020093, Japan 3.ShanghaiTech Univ, iHuman Inst, Shanghai, Peoples R China |
通讯作者单位 | iHuman研究所 |
推荐引用方式 GB/T 7714 | Aoki, Yasunori,Sugiyama, Yuichi. Cluster Gauss-Newton method for a quick approximation of profile likelihood: With application to physiologically-based pharmacokinetic models[J]. CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY,2023. |
APA | Aoki, Yasunori,&Sugiyama, Yuichi.(2023).Cluster Gauss-Newton method for a quick approximation of profile likelihood: With application to physiologically-based pharmacokinetic models.CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY. |
MLA | Aoki, Yasunori,et al."Cluster Gauss-Newton method for a quick approximation of profile likelihood: With application to physiologically-based pharmacokinetic models".CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY (2023). |
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