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Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage
2023-06-01
发表期刊NATURE MICROBIOLOGY (IF:20.5[JCR-2023],21.0[5-Year])
ISSN2058-5276
发表状态已发表
DOI10.1038/s41564-023-01410-1
摘要

["Many bacteriophages evade bacterial immune recognition by substituting adenine with 2,6-diaminopurine (Z) in their genomes. The Z-genome biosynthetic pathway involves PurZ that belongs to the PurA (adenylosuccinate synthetase) family and bears particular similarity to archaeal PurA. However, how the transition of PurA to PurZ occurred during evolution is not clear; recapturing this process may shed light on the origin of Z-containing phages. Here we describe the computer-guided identification and biochemical characterization of a naturally existing PurZ variant, PurZ0, which uses guanosine triphosphate as the phosphate donor rather than the ATP used by PurZ. The atomic resolution structure of PurZ0 reveals a guanine nucleotide binding pocket highly analogous to that of archaeal PurA. Phylogenetic analyses suggest PurZ0 as an intermediate during the evolution of archaeal PurA to phage PurZ. Maintaining the balance of different purines necessitates further evolvement of guanosine triphosphate-using PurZ0 to ATP-using PurZ in adaptation to Z-genome life.","An alternative diaminopurine (Z) biosynthetic pathway using PurZ0 is found in bacteriophages and used for bacterial immune evasion, with higher structural and biochemical similarities to archaeal PurA than PurZ."]

URL查看原文
收录类别SCI
语种英语
资助项目National Natural Science Foundation of China (NSFC) Distinguished Young Scholar of China Program[
WOS研究方向Microbiology
WOS类目Microbiology
WOS记录号WOS:001004926900001
出版者NATURE PORTFOLIO
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/316458
专题iHuman研究所
生命科学与技术学院
iHuman研究所_PI研究组_赵素文组
生命科学与技术学院_硕士生
生命科学与技术学院_博士生
通讯作者Li, Meng; Zhao, Suwen; Zhang, Yan
作者单位
1.Tianjin Univ, Sch Pharmaceut Sci & Technol, Collaborat Innovat Ctr Chem Sci & Engn, Tianjin Key Lab Modern Drug Delivery & High Effici, Tianjin, Peoples R China
2.Tianjin Univ, Minist Educ, Frontiers Sci Ctr Synthet Biol, Tianjin, Peoples R China
3.Tianjin Univ, Sch Chem Engn & Technol, Minist Educ, Key Lab Syst Bioengn, Tianjin, Peoples R China
4.Tianjin Univ, Dept Chem, Tianjin, Peoples R China
5.ShanghaiTech Univ, iHuman Inst, Shanghai, Peoples R China
6.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai, Peoples R China
7.Shenzhen Univ, Inst Adv Study, Archaeal Biol Ctr, Shenzhen, Peoples R China
8.Shenzhen Univ, Inst Adv Study, Shenzhen Key Lab Marine Microbiome Engn, Shenzhen, Peoples R China
通讯作者单位iHuman研究所;  生命科学与技术学院
推荐引用方式
GB/T 7714
Tong, Yang,Wu, Xinying,Liu, Yang,et al. Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage[J]. NATURE MICROBIOLOGY,2023.
APA Tong, Yang.,Wu, Xinying.,Liu, Yang.,Chen, Huiyu.,Zhou, Yan.,...&Zhang, Yan.(2023).Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage.NATURE MICROBIOLOGY.
MLA Tong, Yang,et al."Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage".NATURE MICROBIOLOGY (2023).
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