ShanghaiTech University Knowledge Management System
Programmable C-to-U RNA editing using the human APOBEC3A deaminase | |
2020-11-16 | |
发表期刊 | EMBO JOURNAL (IF:9.4[JCR-2023],11.0[5-Year]) |
ISSN | 0261-4189 |
发表状态 | 已发表 |
DOI | 10.15252/embj.2020104741 |
摘要 | Programmable RNA cytidine deamination has recently been achieved using a bifunctional editor (RESCUE-S) capable of deaminating both adenine and cysteine. Here, we report the development of "CURE", the first cytidine-specific C-to-U RNA Editor. CURE comprises the cytidine deaminase enzyme APOBEC3A fused to dCas13 and acts in conjunction with unconventional guide RNAs (gRNAs) designed to induce loops at the target sites. Importantly, CURE does not deaminate adenosine, enabling the high-specificity versions of CURE to create fewer missense mutations than RESCUE-S at the off-targets transcriptome-wide. The two editing approaches exhibit overlapping editing motif preferences, with CURE and RESCUE-S being uniquely able to edit UCC and AC motifs, respectively, while they outperform each other at different subsets of the UC targets. Finally, a nuclear-localized version of CURE, but not that of RESCUE-S, can efficiently edit nuclear RNAs. Thus, CURE and RESCUE are distinct in design and complementary in utility. |
关键词 | Apobec programmable RESCUE RNA editing site-directed RNA editing |
收录类别 | SCI ; SCIE |
资助项目 | National Natural Science Foundation of China[31922048] |
WOS研究方向 | Biochemistry & Molecular Biology ; Cell Biology |
WOS类目 | Biochemistry & Molecular Biology ; Cell Biology |
WOS记录号 | WOS:000577671500001 |
出版者 | WILEY |
引用统计 | 正在获取...
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文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/123488 |
专题 | 生命科学与技术学院_博士生 生命科学与技术学院_PI研究组_池天组 生命科学与技术学院_PI研究组_黄行许组 生命科学与技术学院_硕士生 |
共同第一作者 | Lv, Junjun; Li, Yongqin |
通讯作者 | Zuo, Erwei; Chi, Tian |
作者单位 | 1.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai, Peoples R China; 2.Univ Chinese Acad Sci, Beijing, Peoples R China; 3.Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Guangdong Lab Lingnan Modern Agr, Shenzhen Branch,Genome Anal Lab,Minist Agr, Shenzhen, Peoples R China; 4.Chinese Acad Sci, Shanghai Res Ctr Brain Sci & Brain Inspired Intel, Shanghai Inst Biol Sci,CAS Ctr Excellence Brain S, Inst Neurosci,State Key Lab Neurosci,Key Lab Prim, Shanghai, Peoples R China; 5.Yale Univ, Sch Med, Dept Immunobiol, New Haven, CT 06520 USA |
第一作者单位 | 生命科学与技术学院 |
通讯作者单位 | 生命科学与技术学院 |
第一作者的第一单位 | 生命科学与技术学院 |
推荐引用方式 GB/T 7714 | Huang, Xinxin,Lv, Junjun,Li, Yongqin,et al. Programmable C-to-U RNA editing using the human APOBEC3A deaminase[J]. EMBO JOURNAL,2020. |
APA | Huang, Xinxin.,Lv, Junjun.,Li, Yongqin.,Mao, Shaoshuai.,Li, Zhifang.,...&Chi, Tian.(2020).Programmable C-to-U RNA editing using the human APOBEC3A deaminase.EMBO JOURNAL. |
MLA | Huang, Xinxin,et al."Programmable C-to-U RNA editing using the human APOBEC3A deaminase".EMBO JOURNAL (2020). |
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