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Multi-state Modeling of GPCRs at Experimental Accuracy via PromptGPCR
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2024
作者:
Zhang KX(张可欣)
;
Sun ZG(孙志刚)
;
Zhang T(张涛)
;
Pang AQ(庞安琪)
;
Yu JL(虞佳乐)
Adobe PDF(962Kb)
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收藏
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浏览/下载:392/20
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提交时间:2024/08/25
Structure prediction
GPCRs
Multi-state Modeling
AlphaFold-Multimer
Prompt
LoRA
A guidebook of spatial transcriptomic technologies, data resources and analysis approaches
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 卷号: 21, 页码: 940-955
作者:
Yue, Liangchen
;
Liu, Feng
;
Hu, Jiongsong
;
Yang, Pin
;
Wang, Yuxiang
Adobe PDF(5611Kb)
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收藏
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浏览/下载:291/0
|
提交时间:2023/03/17
Diagnosis
Disease control
Gene expression
Analysis approach
Cellular genes
Data resources
Disease diagnosis
Genes expression
Multicellular organisms
Single cells
Spatial transcriptomic technology
Technology data
Transcriptomics
The interconnection of endoplasmic reticulum and microtubule and its implication in Hereditary Spastic Paraplegia
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 卷号: 21, 页码: 1670-1677
作者:
Wang, Xinjian
;
Fan, Chengyu
;
Liu, Yanfen
;
Zou, Yan
Adobe PDF(2797Kb)
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浏览/下载:480/3
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提交时间:2023/03/10
Biochemistry
Neurodegenerative diseases
Transportation routes
Endoplasmic reticulum
Endoplasmic reticulum membrane protein
Endoplasmic reticulum membranes
Endoplasmic reticulum shaping protein
Endoplasmic reticulum-microtubule
Hereditary spastic paraplegia
Membrane proteins
Microtubule dynamics
Microtubules
Single-cell entropy network detects the activity of immune cells based on ribosomal protein genes
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 卷号: 20, 页码: 3556-3566
作者:
Jin, Qiqi
;
Zuo, Chunman
;
Cui, Haoyue
;
Li, Lin
;
Yang, Yiwen
Adobe PDF(4102Kb)
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收藏
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浏览/下载:318/0
|
提交时间:2022/08/12
Computation theory
Association entropies
Cytology
Cell entropy
Entropy
Cell types
Proteins
Cell-based
RNA
Immune cells
Ribosomal protein genes
Single cells
Single-cell entropy network
Single-cell RNA-seq
Virulence-related regulatory network of Pseudomonas syringae
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 卷号: 20, 页码: 6259-6270
作者:
Huang, Jiadai
;
Yao, Chunyan
;
Sun, Yue
;
Ji, Quanjiang
;
Deng, Xin
Adobe PDF(3630Kb)
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收藏
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浏览/下载:269/0
|
提交时间:2022/12/16
Bacteria
Transcription
Biological process
Chromatin immunoprecipitation
Gene transcriptions
Phytopathogenic bacteria
Promoter region
Pseudomonas syringae
Putative transcription factors
Regulatory network
Transcription level
Virulence
CRISPR-surfaceome: An online tool for designing highly efficient sgRNAs targeting cell surface proteins
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 卷号: 20, 页码: 3833-3838
作者:
Mei, Hong
;
Gu, Qian
;
Wang, Wei
;
Meng, Yu
;
Jiang, Lichun
Adobe PDF(1610Kb)
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收藏
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浏览/下载:355/7
|
提交时间:2022/08/08
Cell membranes
Cytology
Database systems
Proteins
Cell surface proteins
CRISPR
Editing tools
Functional genomics
Genomic studies
Human cells
On-line tools
Online database
Single guide RNA
Surfaceome
Hinge region mediates signal transmission of luteinizing hormone and chorionic gonadotropin receptor
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 卷号: 20, 页码: 6503-6511
作者:
He, Xinheng
;
Duan, Jia
;
Ji, Yujie
;
Zhao, Lifen
;
Jiang, Hualiang
Adobe PDF(3713Kb)
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收藏
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浏览/下载:336/0
|
提交时间:2022/12/16
Activation analysis
Biochemistry
Chemical activation
Glycoproteins
Hormones
Proteins
Dynamics simulation
Evolutionary analyse
Extracellular domains
G protein coupled receptors
Glycoprotein hormone receptors
Molecular dynamic simulation
Protein dynamics
Signal transmission
Trans-membrane domains
Transmembrane domain
Identification of a novel class of cyclic penta-peptides against hepatitis C virus as p7 channel blockers
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 卷号: 20
作者:
Wei, Shukun
;
Liu, Chaolun
;
Du, Lingyu
;
Wu, Bin
;
Zhong, Jin
Adobe PDF(2101Kb)
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收藏
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浏览/下载:304/0
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提交时间:2023/02/10
Drug design
Cyclic penta-peptide
Channel blocker
P7
HCV
NMR
Molecular dynamics simulations
Dissecting the role of glutamine in seeding peptide aggregation
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2021, 卷号: 19, 页码: 1595-1602
作者:
Barrera, Exequiel E.
;
Zonta, Francesco
;
Pantano, Sergio
Adobe PDF(2394Kb)
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收藏
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浏览/下载:241/0
|
提交时间:2021/09/10
Polyglutamine diseases
Peptide aggregation
Toxic oligomers
Molecular dynamics
Coarse grained modelling
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