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ShanghaiTech University Knowledge Management System
Virulence-related regulatory network of Pseudomonas syringae | |
2022-01 | |
发表期刊 | COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (IF:4.4[JCR-2023],5.0[5-Year]) |
ISSN | 2001-0370 |
EISSN | 2001-0370 |
卷号 | 20页码:6259-6270 |
发表状态 | 已发表 |
DOI | 10.1016/j.csbj.2022.11.011 |
摘要 | Transcription factors (TFs) play important roles in regulating multiple biological processes by binding to promoter regions and regulating the global gene transcription levels. Pseudomonas syringae is a Gram-negative phytopathogenic bacterium harbouring 301 putative TFs in its genome, approximately 50 of which are responsible for virulence-related gene and pathway regulation. Over the past decades, RNA sequencing, chromatin immunoprecipitation sequencing, high-throughput systematic evolution of ligands by exponential enrichment, and other technologies have been applied to identify the functions of master regulators and their interactions in virulence-related pathways. This review summarises the recent advances in the regulatory networks of TFs involved in the type III secretion system (T3SS) and non-T3SS virulence-associated pathways, including motility, biofilm formation, quorum sensing, nucleotide-based secondary messengers, phytotoxins, siderophore production, and oxidative stress. Moreover, this review discusses the future perspectives in terms of TF-mediated pathogenesis mechanisms and provides novel insights that will help combat P. syringae infections based on the regulatory networks of TFs. © 2022 The Author(s) |
关键词 | Bacteria Transcription Biological process Chromatin immunoprecipitation Gene transcriptions Phytopathogenic bacteria Promoter region Pseudomonas syringae Putative transcription factors Regulatory network Transcription level Virulence |
收录类别 | EI |
语种 | 英语 |
出版者 | Elsevier B.V. |
EI入藏号 | 20224913215541 |
EI主题词 | Transcription factors |
EI分类号 | 461.9 Biology |
原始文献类型 | Journal article (JA) |
引用统计 | 正在获取...
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文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/256348 |
专题 | 生命科学与技术学院 物质科学与技术学院_PI研究组_季泉江组 |
通讯作者 | Deng, Xin |
作者单位 | 1.Department of Biomedical Sciences, City University of Hong Kong, Kowloon Tong, 999077, Hong Kong; 2.Shenzhen Research Institute, City University of Hong Kong, Shenzhen; 518057, China; 3.Gene Editing Center, School of Life Science and Technology, ShanghaiTech University, Shanghai; 201210, China |
推荐引用方式 GB/T 7714 | Huang, Jiadai,Yao, Chunyan,Sun, Yue,et al. Virulence-related regulatory network of Pseudomonas syringae[J]. COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL,2022,20:6259-6270. |
APA | Huang, Jiadai,Yao, Chunyan,Sun, Yue,Ji, Quanjiang,&Deng, Xin.(2022).Virulence-related regulatory network of Pseudomonas syringae.COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL,20,6259-6270. |
MLA | Huang, Jiadai,et al."Virulence-related regulatory network of Pseudomonas syringae".COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL 20(2022):6259-6270. |
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