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Virulence-related regulatory network of Pseudomonas syringae
2022-01
发表期刊COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (IF:4.4[JCR-2023],5.0[5-Year])
ISSN2001-0370
EISSN2001-0370
卷号20页码:6259-6270
发表状态已发表
DOI10.1016/j.csbj.2022.11.011
摘要

Transcription factors (TFs) play important roles in regulating multiple biological processes by binding to promoter regions and regulating the global gene transcription levels. Pseudomonas syringae is a Gram-negative phytopathogenic bacterium harbouring 301 putative TFs in its genome, approximately 50 of which are responsible for virulence-related gene and pathway regulation. Over the past decades, RNA sequencing, chromatin immunoprecipitation sequencing, high-throughput systematic evolution of ligands by exponential enrichment, and other technologies have been applied to identify the functions of master regulators and their interactions in virulence-related pathways. This review summarises the recent advances in the regulatory networks of TFs involved in the type III secretion system (T3SS) and non-T3SS virulence-associated pathways, including motility, biofilm formation, quorum sensing, nucleotide-based secondary messengers, phytotoxins, siderophore production, and oxidative stress. Moreover, this review discusses the future perspectives in terms of TF-mediated pathogenesis mechanisms and provides novel insights that will help combat P. syringae infections based on the regulatory networks of TFs. © 2022 The Author(s)

关键词Bacteria Transcription Biological process Chromatin immunoprecipitation Gene transcriptions Phytopathogenic bacteria Promoter region Pseudomonas syringae Putative transcription factors Regulatory network Transcription level Virulence
收录类别EI
语种英语
出版者Elsevier B.V.
EI入藏号20224913215541
EI主题词Transcription factors
EI分类号461.9 Biology
原始文献类型Journal article (JA)
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/256348
专题生命科学与技术学院
物质科学与技术学院_PI研究组_季泉江组
通讯作者Deng, Xin
作者单位
1.Department of Biomedical Sciences, City University of Hong Kong, Kowloon Tong, 999077, Hong Kong;
2.Shenzhen Research Institute, City University of Hong Kong, Shenzhen; 518057, China;
3.Gene Editing Center, School of Life Science and Technology, ShanghaiTech University, Shanghai; 201210, China
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GB/T 7714
Huang, Jiadai,Yao, Chunyan,Sun, Yue,et al. Virulence-related regulatory network of Pseudomonas syringae[J]. COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL,2022,20:6259-6270.
APA Huang, Jiadai,Yao, Chunyan,Sun, Yue,Ji, Quanjiang,&Deng, Xin.(2022).Virulence-related regulatory network of Pseudomonas syringae.COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL,20,6259-6270.
MLA Huang, Jiadai,et al."Virulence-related regulatory network of Pseudomonas syringae".COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL 20(2022):6259-6270.
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