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A dual-effect of FUBP1 on the SPA lncRNA maturation | |
2025-04 | |
发表期刊 | RNA (IF:4.2[JCR-2023],4.4[5-Year]) |
ISSN | 1469-9001 |
发表状态 | 正式接收 |
DOI | 10.1261/rna.080341.124 |
摘要 | SPAs are noncanonical long noncoding RNAs (lncRNAs) that are 5' small nucleolar RNA (snoRNA) capped and 3' polyadenylated. Two SPAs are processed from a polycistronic transcript embedded in the human 15q11-13 region related to Prader-Willi Syndrome (PWS). Once produced, SPAs accumulate at their transcription site and sequester splicing factors to form PWS-related nuclear bodies that are involved in alternative splicing regulation. But how the processing of SPAs is regulated has remained obscure. Here, we identified both Far upstream element-binding protein 1 (FUBP1) and Myelin expression factor 2 (MYEF2) enriched in the PWS-related nuclear bodies, loss of both, individually, impaired SPAs expression and dampened the size of PWS-related nuclear bodies in H9 and PA1 cells. Specifically, FUBP1 on the one hand enhances SPAs transcription by targeting the FUSE-like sequence upstream of the polycistronic transcript promoter, and on the other hand, is required for SPA1 splicing and maturation by binding the uridine (U)-rich intronic sequences. These findings suggest a comprehensive and distinct regulation of PWS region-derived SPA lncRNAs. |
关键词 | FUBP1 RNA splicing RNA transcription SPAs lncRNA |
学科门类 | 理学::生物学 |
文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/517733 |
专题 | 生命科学与技术学院_博士生 生命科学与技术学院_特聘教授组_陈玲玲组 |
通讯作者 | Wu, Hao |
作者单位 | 1.Key Laboratory of RNA Innovation, Science and Engineering, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200031, China 2.School of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China 2. Key Laboratory of RNA Innovation, Science and Engineering, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200031, China 3.Center for Molecular Medicine, Children’s Hospital of Fudan University and Shanghai Key Laboratory of Medical Epigenetics, International Laboratory of Medical Epigenetics and Metabolism, Ministry of Science and Technology, Institutes of Biomedical Sciences, Fudan University, Shanghai, China 4.School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China 5.New Cornerstone Science Laboratory, Shenzhen 518054, China 6.Shanghai Academy of Natural Sciences (SANS), Shanghai 200031, China |
第一作者单位 | 生命科学与技术学院 |
推荐引用方式 GB/T 7714 | Yang, Zheng-Hu,Nan, Fang,Xu, Guang,et al. A dual-effect of FUBP1 on the SPA lncRNA maturation[J]. RNA,2025. |
APA | Yang, Zheng-Hu.,Nan, Fang.,Xu, Guang.,Wu, Huang.,Wei, Meng-Yuan.,...&Wu, Hao.(2025).A dual-effect of FUBP1 on the SPA lncRNA maturation.RNA. |
MLA | Yang, Zheng-Hu,et al."A dual-effect of FUBP1 on the SPA lncRNA maturation".RNA (2025). |
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