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RPA transforms RNase H1 to a bidirectional exonuclease for efficient RNA–DNA hybrid cleavage
2024-08-29
发表期刊NATURE COMMUNICATIONS (IF:14.7[JCR-2023],16.1[5-Year])
ISSN2041-1723
EISSN2041-1723
卷号15页码:7464
发表状态已发表
DOI10.1038/s41467-024-51984-5
摘要

["RNase H1 has been acknowledged as an endoribonuclease specializing in the internal degradation of the RNA moiety within RNA-DNA hybrids, and its ribonuclease activity is indispensable in multifaceted aspects of nucleic acid metabolism. However, the molecular mechanism underlying RNase H1-mediated hybrid cleavage remains inadequately elucidated. Herein, using single-molecule approaches, we probe the dynamics of the hybrid cleavage by Saccharomyces cerevisiae RNase H1. Remarkably, a single RNase H1 enzyme displays 3 '-to-5 ' exoribonuclease activity. The directional RNA degradation proceeds processively and yet discretely, wherein unwinding approximately 6-bp hybrids as a prerequisite for two consecutive 3-nt RNA excisions limits the overall rate within each catalytic cycle. Moreover, Replication Protein A (RPA) reinforces RNase H1's 3 '-to-5 ' nucleolytic rate and processivity and stimulates its 5 '-to-3 ' exoribonuclease activity. This stimulation is primarily realized through the pre-separation of the hybrids and consequently transfers RNase H1 to a bidirectional exoribonuclease, further potentiating its cleavage efficiency. These findings unveil unprecedented characteristics of an RNase and provide a dynamic view of RPA-enhanced processive hybrid cleavage by RNase H1.","RNase H1 functions as an endonuclease degrading the RNA moiety within RNA-DNA hybrids. Here the authors find that RNase H1 displays 3 '-to-5 ' exonuclease activity. Moreover, RPA reinforces RNase H1's 3 '-to-5 ' nucleolytic rate and processivity and stimulates its 5 '-to-3 ' exonuclease activity."]

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收录类别SCI
语种英语
资助项目National Natural Science Foundation of China (National Science Foundation of China)[
WOS研究方向Science & Technology - Other Topics
WOS类目Multidisciplinary Sciences
WOS记录号WOS:001301007500006
出版者NATURE PORTFOLIO
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/414273
专题生命科学与技术学院_博士生
生命科学与技术学院_PI研究组_孙博组
共同第一作者Liu, Chao
通讯作者Li, Wei; Sun, Bo
作者单位
1.School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
2.GuangzhouWomen andChildren’sMedical Center, GuangzhouMedical University, Guangzhou, China.
3.State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing,China.
4.University ofChinese Academy of Sciences, Beijing,China.
5.Interdisciplinary ResearchCenter on Biology andChemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, China.
第一作者单位生命科学与技术学院
通讯作者单位生命科学与技术学院
第一作者的第一单位生命科学与技术学院
推荐引用方式
GB/T 7714
Li, Yanan,Liu, Chao,Jia, Xinshuo,et al. RPA transforms RNase H1 to a bidirectional exonuclease for efficient RNA–DNA hybrid cleavage[J]. NATURE COMMUNICATIONS,2024,15:7464.
APA Li, Yanan.,Liu, Chao.,Jia, Xinshuo.,Bi, Lulu.,Ren, Zhiyun.,...&Sun, Bo.(2024).RPA transforms RNase H1 to a bidirectional exonuclease for efficient RNA–DNA hybrid cleavage.NATURE COMMUNICATIONS,15,7464.
MLA Li, Yanan,et al."RPA transforms RNase H1 to a bidirectional exonuclease for efficient RNA–DNA hybrid cleavage".NATURE COMMUNICATIONS 15(2024):7464.
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