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ShanghaiTech University Knowledge Management System
Surfaceome CRISPR screen identifies OLFML3 as a rhinovirus-inducible IFN antagonist | |
2021-10-22 | |
发表期刊 | GENOME BIOLOGY (IF:10.1[JCR-2023],16.5[5-Year]) |
ISSN | 1474-760X |
卷号 | 22期号:1 |
发表状态 | 已发表 |
DOI | 10.1186/s13059-021-02513-w |
摘要 | Background Rhinoviruses (RVs) cause more than half of common colds and, in some cases, more severe diseases. Functional genomics analyses of RVs using siRNA or genome-wide CRISPR screen uncovered a limited set of host factors, few of which have proven clinical relevance. Results Herein, we systematically compare genome-wide CRISPR screen and surface protein-focused CRISPR screen, referred to as surfaceome CRISPR screen, for their efficiencies in identifying RV host factors. We find that surfaceome screen outperforms the genome-wide screen in the success rate of hit identification. Importantly, using the surfaceome screen, we identify olfactomedin-like 3 (OLFML3) as a novel host factor of RV serotypes A and B, including a clinical isolate. We find that OLFML3 is a RV-inducible suppressor of the innate immune response and that OLFML3 antagonizes type I interferon (IFN) signaling in a SOCS3-dependent manner. Conclusion Our study suggests that RV-induced OLFML3 expression is an important mechanism for RV to hijack the immune system and underscores surfaceome CRISPR screen in identifying viral host factors. |
关键词 | CRISPR Genome-wide screen Surfaceome screen Rhinovirus OLFML3 |
URL | 查看原文 |
收录类别 | SCIE |
语种 | 英语 |
WOS研究方向 | Biotechnology & Applied Microbiology ; Genetics & Heredity |
WOS类目 | Biotechnology & Applied Microbiology ; Genetics & Heredity |
WOS记录号 | WOS:000710145000002 |
出版者 | BMC |
原始文献类型 | Article |
引用统计 | 正在获取...
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文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/128507 |
专题 | 免疫化学研究所_公共科研平台_生物医学大数据平台 免疫化学研究所_特聘教授组_抗体设计学实验室 生命科学与技术学院_硕士生 生命科学与技术学院_博士生 免疫化学研究所_PI研究组_刘佳组 |
通讯作者 | Qu, Jieming; Liu, Jia |
作者单位 | 1.ShanghaiTech Univ, Shanghai Inst Adv Immunochem Studies, Shanghai 201210, Peoples R China; 2.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China; 3.Shanghai Jiao Tong Univ, Ruijin Hosp, Sch Med, Dept Resp & Crit Care Med, Shanghai 200025, Peoples R China; 4.Shanghai Jiao Tong Univ, Inst Resp Dis, Sch Med, Shanghai 200025, Peoples R China; 5.Univ Chinese Acad Sci, Beijing 100049, Peoples R China; 6.Shanghai Jiao Tong Univ, Ruijin Hosp, Res Lab Clin Virol, Sch Med, Shanghai 200025, Peoples R China; 7.Shanghai Clin Res & Trial Ctr, Shanghai 201210, Peoples R China; 8.Guangzhou Med Univ, State Key Lab Resp Dis, Guangzhou 510182, Guangdong, Peoples R China; 9.ShanghaiTech Univ, Gene Editing Ctr, Sch Life Sci & Technol, Shanghai 201210, Peoples R China; 10.Guangzhou Lab, 9 XingDaoHuanBei Rd, Guangzhou 510005, Guangdong, Peoples R China |
第一作者单位 | 免疫化学研究所; 生命科学与技术学院 |
通讯作者单位 | 免疫化学研究所; 生命科学与技术学院 |
第一作者的第一单位 | 免疫化学研究所 |
推荐引用方式 GB/T 7714 | Mei, Hong,Zha, Zhao,Wang, Wei,et al. Surfaceome CRISPR screen identifies OLFML3 as a rhinovirus-inducible IFN antagonist[J]. GENOME BIOLOGY,2021,22(1). |
APA | Mei, Hong.,Zha, Zhao.,Wang, Wei.,Xie, Yusang.,Huang, Yuege.,...&Liu, Jia.(2021).Surfaceome CRISPR screen identifies OLFML3 as a rhinovirus-inducible IFN antagonist.GENOME BIOLOGY,22(1). |
MLA | Mei, Hong,et al."Surfaceome CRISPR screen identifies OLFML3 as a rhinovirus-inducible IFN antagonist".GENOME BIOLOGY 22.1(2021). |
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