Identification of Potential Binding Sites of Sialic Acids on the RBD Domain of SARS-CoV-2 Spike Protein
2021-07-22
发表期刊FRONTIERS IN CHEMISTRY
ISSN2296-2646
卷号9
发表状态已发表
DOI10.3389/fchem.2021.659764
摘要

COVID-19, caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is still an emergent pandemic for humans. The virus infection is achieved by penetrating its spike protein to host cells via binding with ACE2. Moreover, recent studies show that SARS-CoV-2 may have multiple receptors that need to be further revealed. SARS-CoV-2 shares similar sequences of the spike protein with the Middle East Respiratory Syndrome Coronavirus (MERS-CoV), which can invade host cells by binding to either DPP4 or sialic acids. Sialic acids can be linked to the terminal of glycoproteins and gangliosides are used as one of the receptors of many types of viruses. Therefore, it is very interesting to determine whether sialic acid is a potential receptor of SARS-CoV-2. To address this question, we took N-Acetylneuraminic acid (Neu5Ac), a type of predominant sialic acid found in human cells, as the molecular probe to computationally search the surface of the spike protein to locate the potential binding sites of Neu5Ac. SPR analysis and mass spectrum analysis confirmed the interaction between Neu5Ac and spike protein. This study shows that sialic acids can moderately interact with the spike protein of SARS-CoV-2 by binding between the two RBDs of the spike protein, indicating it could be a potential secondary or auxiliary receptor of SARS-CoV-2.

关键词SARS-CoV-2 receptor sialic acid RBD domain spike protein
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收录类别SCIE
语种英语
WOS研究方向Chemistry
WOS类目Chemistry, Multidisciplinary
WOS记录号WOS:000687986900001
出版者FRONTIERS MEDIA SA
原始文献类型Article
引用统计
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/128054
专题生命科学与技术学院_博士生
免疫化学研究所
免疫化学研究所_公共科研平台_分析化学平台
生命科学与技术学院_本科生
信息科学与技术学院_硕士生
免疫化学研究所_PI研究组_白芳组
共同第一作者Wang, Lin; Ge, Huan
通讯作者Zhu, Wei; Chen, Wenzhang; Zhu, Lili; Bai, Fang
作者单位
1.ShanghaiTech Univ, Shanghai Inst Adv Immunochem Studies, Shanghai, Peoples R China;
2.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai, Peoples R China;
3.Imperial Coll London, Dept Chem, London, England;
4.East China Univ Sci & Technol, Sch Pharm, State Key Lab Bioreactor Engn, Shanghai Key Lab New Drug Design, Shanghai, Peoples R China;
5.Nankai Univ, State Key Lab Med Chem Biol, Tianjin, Peoples R China;
6.Nankai Univ, Coll Pharm, Tianjin, Peoples R China;
7.Natl Ctr Prot Sci Shanghai, Shanghai, Peoples R China
第一作者单位免疫化学研究所;  生命科学与技术学院
通讯作者单位免疫化学研究所;  生命科学与技术学院
第一作者的第一单位免疫化学研究所
推荐引用方式
GB/T 7714
Li, Bingqian,Wang, Lin,Ge, Huan,et al. Identification of Potential Binding Sites of Sialic Acids on the RBD Domain of SARS-CoV-2 Spike Protein[J]. FRONTIERS IN CHEMISTRY,2021,9.
APA Li, Bingqian.,Wang, Lin.,Ge, Huan.,Zhang, Xianglei.,Ren, Penxuan.,...&Bai, Fang.(2021).Identification of Potential Binding Sites of Sialic Acids on the RBD Domain of SARS-CoV-2 Spike Protein.FRONTIERS IN CHEMISTRY,9.
MLA Li, Bingqian,et al."Identification of Potential Binding Sites of Sialic Acids on the RBD Domain of SARS-CoV-2 Spike Protein".FRONTIERS IN CHEMISTRY 9(2021).
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