Developing PspCas13b-based enhanced RESCUE system, eRESCUE, with efficient RNA base editing
2021-08-11
发表期刊CELL COMMUNICATION AND SIGNALING
ISSN1478-811X
EISSN1478-811X
卷号19期号:1
发表状态已发表
DOI10.1186/s12964-021-00716-z
摘要

RNA base editing is potential for cellular function research and genetic diseases treating. There are two main RNA base editors, REPAIR and RESCUE, for in vitro use. REPAIR was developed by fusing inactivated Cas13 (dCas13) with the adenine deaminase domain of ADAR2, which efficiently performs adenosine-to-inosine (A-to-I) RNA editing. RESCUE, which performs both cytidine-to-uridine (C-to-U) and A-to-I RNA editing, was developed by fusing inactivated Cas13 (dCas13) with the evolved ADAR2. However, the relatively low editing efficiency of the RESCUE system limits its broad application. Here, we constructed an enhanced RESCUE (eRESCUE) system; this dPspCas13b-RESCUE-NES system was generated by fusing inactivated PspCas13b with the evolved ADAR2. We determined the endogenous mRNA A-to-I and C-to-U editing efficiency mediated by the dPspCas13b-RESCUE-NES system in HEK-293T cells. This new RNA base editor was then used to induce 177Ser/Gly conversion of inhibitor kappa B kinase beta (IKK beta) by changing the genetic code from AGU to GGU. The results showed that the eRESCUE editor mediates more efficient A-to-I and C-to-U RNA editing than the RESCUE RNA editor, as was previously reported. The 177Ser/Gly conversion of IKK beta, accomplished by converting the genetic code from AGU to GGU, resulted in a decrease in the phosphorylation of IKK beta and downregulation of downstream IKK beta-related genes. In summary, we developed a more efficient RNA base editor, eRESCUE, which may provide a useful tool for biomedical research and genetic disease treatment.

关键词RNA base editing eRESCUE Phosphorylation IKK beta
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收录类别SCIE
语种英语
WOS研究方向Cell Biology
WOS类目Cell Biology
WOS记录号WOS:000684265200001
出版者BMC
原始文献类型Article
引用统计
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/127994
专题生命科学与技术学院_博士生
生命科学与技术学院_PI研究组_黄行许组
共同第一作者Wang, Yihan
通讯作者Hu, Xiaoxiang
作者单位
1.China Agr Univ, State Key Lab Agrobiotechnol, 2 Yuanmingyuan West Rd, Beijing 100193, Peoples R China;
2.China Agr Univ, Coll Biol Sci, 2 Yuanmingyuan West Rd, Beijing 100193, Peoples R China;
3.Natl Res Inst Family Planning, 12 Dahuisi Rd, Beijing 100081, Peoples R China;
4.Peking Union Med Coll, Grad Sch, 9 Dongdan Santiao, Beijing 100730, Peoples R China;
5.ShanghaiTech Univ, Sch Life Sci & Technol, 100 Haike Rd, Shanghai 200031, Peoples R China;
6.China Agr Univ, Coll Anim Sci & Technol, 2 Yuanmingyuan West Rd, Beijing 100193, Peoples R China;
7.Chinese Acad Sci, Univ Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci, Shanghai Inst Biochem & Cell Biol, 320 Yueyang Rd, Shanghai 200031, Peoples R China
推荐引用方式
GB/T 7714
Li, Guo,Wang, Yihan,Li, Xiangyang,et al. Developing PspCas13b-based enhanced RESCUE system, eRESCUE, with efficient RNA base editing[J]. CELL COMMUNICATION AND SIGNALING,2021,19(1).
APA Li, Guo.,Wang, Yihan.,Li, Xiangyang.,Wang, Yuzhe.,Huang, Xingxu.,...&Hu, Xiaoxiang.(2021).Developing PspCas13b-based enhanced RESCUE system, eRESCUE, with efficient RNA base editing.CELL COMMUNICATION AND SIGNALING,19(1).
MLA Li, Guo,et al."Developing PspCas13b-based enhanced RESCUE system, eRESCUE, with efficient RNA base editing".CELL COMMUNICATION AND SIGNALING 19.1(2021).
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