THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration
2024-01-02
发表期刊NUCLEIC ACIDS RESEARCH (IF:16.6[JCR-2023],16.1[5-Year])
ISSN0305-1048
EISSN1362-4962
发表状态已发表
DOI10.1093/nar/gkad1243
摘要

The mechanisms by which the relatively conserved spliceosome manages the enormously large number of splicing events that occur in humans (∼200 000 versus ∼300 in yeast) are poorly understood. Here, we show deposition of one RNA modification-N2-methylguanosine (m2G) on the G72 of U6 snRNA (the catalytic center of the spliceosome) promotes efficient pre-mRNA splicing activity in human cells. This modification was identified to be conserved among vertebrates. Further, THUMPD2 was demonstrated as the methyltransferase responsible for U6 m2G72 by explicitly recognizing the U6-specific sequences and structural elements. The knock-out of THUMPD2 eliminated U6 m2G72 and impaired the pre-mRNA splicing activity, resulting in thousands of changed alternative splicing events of endogenous pre-mRNAs in human cells. Notably, the aberrantly spliced pre-mRNA population elicited the nonsense-mediated mRNA decay pathway. We further show that THUMPD2 was associated with age-related macular degeneration and retinal function. Our study thus demonstrates how an RNA epigenetic modification of the major spliceosome regulates global pre-mRNA splicing and impacts physiology and disease.
 

收录类别SCI
语种英语
WOS研究方向Biochemistry & Molecular Biology
WOS类目Biochemistry & Molecular Biology
出版者OXFORD UNIV PRESS
原始文献类型Article
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/357305
专题生命科学与技术学院_博士生
生命科学与技术学院_PI研究组_刘如娟组
共同第一作者Ge, Jian-Yang
通讯作者Beisi Xu; Liu, Ru-Juan
作者单位
1.生命科学与技术学院
2.University of Science and Technology of China
3.Westlake University
4.St. Jude Children’s Research Hospital, Memphis
推荐引用方式
GB/T 7714
Yang, Wen-Qing,Ge, Jian-Yang,Xiaofeng Zhang,et al. THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration[J]. NUCLEIC ACIDS RESEARCH,2024.
APA Yang, Wen-Qing.,Ge, Jian-Yang.,Xiaofeng Zhang.,Wen-Yu Zhu.,Lin Lin.,...&Liu, Ru-Juan.(2024).THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration.NUCLEIC ACIDS RESEARCH.
MLA Yang, Wen-Qing,et al."THUMPD2 catalyzes the N2-methylation of U6 snRNA of the spliceosome catalytic center and regulates pre-mRNA splicing and retinal degeneration".NUCLEIC ACIDS RESEARCH (2024).
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