Characterization of the evolution trajectory and immune profiling of new histologic patterns in lung adenocarcinoma
2022-09-21
发表期刊JOURNAL OF GENE MEDICINE (IF:3.2[JCR-2023],3.1[5-Year])
ISSN1099-498X
EISSN1521-2254
发表状态已发表
DOI10.1002/jgm.3455
摘要

In lung adenocarcinoma (LUAD), the appearance of morphologically diverse tumor regions, termed histological patterns, is closely associated with disease progression and lymph node metastasis. However, the molecular characteristics of the histological patterns in LUAD and the underlying molecular evolutionary mechanisms between the histological patterns in primary tumors and lymph node metastases are poorly understood. Here, we re-analyzed the large TCGA-LUAD dataset and depicted a comprehensive profiling of the genome and transcriptome across the histological patterns in LUAD. Tumor phylogenetic trajectory analysis suggested that the complex glands is more apt to metastasize to the lymph node. Further deconvolution of the tumor microenvironment demonstrated that the complex glands had a higher infiltration of cancer-associated fibroblasts (CAFs). Single-cell transcriptome profiling of complex glands pattern identified a novel CAF subtype co-expressing fibroblast activation protein-alpha (FAP) and stimulator of interferon genes (STING). Moreover, our data demonstrated that FAP is an important downstream effector of STING in CAFs. In summary, our results provide the basis for the development of innovative therapeutic guidelines and intervention strategies for LUAD patients.

关键词cancer-associated fibroblasts complex glands evolutionary trajectory lung cancer Lung cancer Complex glands Evolutionary trajectory Cancer-associated fibroblasts
收录类别SCIE
语种英语
WOS研究方向Biotechnology & Applied Microbiology ; Genetics & Heredity ; Research & Experimental Medicine
WOS类目Biotechnology & Applied Microbiology ; Genetics & Heredity ; Medicine, Research & Experimental
WOS记录号WOS:000868496300001
出版者WILEY
原始文献类型Article; Early Access
引用统计
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/243346
专题生命科学与技术学院_博士生
生命科学与技术学院_PI研究组_张力烨组
共同第一作者Xie, Huikang; Liu, Wei; Zhao, Mengmeng
通讯作者Li, Hanjie; Ren, Yijiu; Chen, Chang
作者单位
1.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai, Peoples R China;
2.Univ Chinese Acad Sci, Beijing, Peoples R China;
3.Tongji Univ, Shanghai Pulm Hosp, Dept Pathol, Sch Med, Shanghai, Peoples R China;
4.Chinese Acad Sci, Shenzhen Inst Synthet Biol, Shenzhen Inst Adv Technol, CAS Key Lab Quantitat Engn Biol, Shenzhen 518055, Peoples R China;
5.Shandong First Med Univ, Res Ctr Translat Med, Jinan Cent Hosp, Jinan, Shandong, Peoples R China;
6.BGI Shenzhen, BGI Beijing, Beijing, Peoples R China;
7.Tongji Univ, Shanghai Pulm Hosp, Cent Lab, Sch Med, Shanghai, Peoples R China;
8.Peking Univ Third Hosp, Dept Gastroenterol & Hepatol, Beijing, Peoples R China;
9.Tongji Univ, Shanghai Pulm Hosp, Dept Thorac Surg, Sch Med, Shanghai 200443, Peoples R China
第一作者单位生命科学与技术学院
第一作者的第一单位生命科学与技术学院
推荐引用方式
GB/T 7714
Song, Minfang,Xie, Huikang,Liu, Wei,et al. Characterization of the evolution trajectory and immune profiling of new histologic patterns in lung adenocarcinoma[J]. JOURNAL OF GENE MEDICINE,2022.
APA Song, Minfang.,Xie, Huikang.,Liu, Wei.,Zhao, Mengmeng.,Deng, Ziqing.,...&Chen, Chang.(2022).Characterization of the evolution trajectory and immune profiling of new histologic patterns in lung adenocarcinoma.JOURNAL OF GENE MEDICINE.
MLA Song, Minfang,et al."Characterization of the evolution trajectory and immune profiling of new histologic patterns in lung adenocarcinoma".JOURNAL OF GENE MEDICINE (2022).
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