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ShanghaiTech University Knowledge Management System
Multifunctional Optical Tomography System With High-Fidelity Surface Extraction Based on a Single Programmable Scanner and Unified Pinhole Modeling | |
2024-04 | |
发表期刊 | IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING (IF:4.4[JCR-2023],4.8[5-Year]) |
ISSN | 1558-2531 |
EISSN | 1558-2531 |
卷号 | 71期号:4页码:1391-1403 |
发表状态 | 已发表 |
DOI | 10.1109/TBME.2023.3336334 |
摘要 | Objective: Macroscopic optical tomography is a non-invasive method that can visualize the 3D distribution of intrinsic optical properties or exogenous fluorophores, making it highly attractive for small animal imaging. However, reconstructing the images requires prior knowledge of surface information. To address this, existing systems often use additional hardware components or integrate multimodal information, which is expensive and introduces new issues such as image registration. Our goal is to develop a multifunctional optical tomography system that can extract surface information using a concise hardware design. Methods: Our proposed system uses a single programmable scanner to implement both surface extraction and optical tomography functions. A unified pinhole model is used to describe both the illumination and detection procedures for capturing 3D point cloud. Line-shaped scanning is adopted to improve both spatial resolution and speed of surface extraction. Finally, we integrate the extracted surface information into the optical tomographic reconstruction to more accurately map the fluorescence distribution. Result: Comprehensive phantom experiments with different levels of complexity were designed to evaluate the performance of surface extraction and fluorescence tomography. We also imaged the axillary lymph nodes in living mice after injection of fluorophore, demonstrating the proposed system facilitates more reliable fluorescence tomography. Conclusion: We have successfully developed a versatile optical tomography system by leveraging concise hardware design and unified pinhole modeling. Phantom validation demonstrates that our system provides high-precision surface information with a maximum error of 0.1 mm, while the surface-guided FMT reconstruction is more reliable than the blind reconstruction using simplified surface geometry, elevating several quantitative metrics including RMSE, CNR, and Dice. Significance: Our work explores the feasibility of obtaining additional surface information using existing components of standalone optical tomography. This makes the optical tomographic technique more accurate and more accessible to biomedical researchers. © 1964-2012 IEEE. |
关键词 | Optical tomography surface extraction fluorescence molecular tomography image reconstruction line scanning Extraction Fluorophores Image reconstruction Noninvasive medical procedures Optical properties Phantoms Biomedical optical imaging Fluorescence molecular tomography Images reconstruction Linescanning Optical imaging Optical reflection Optical scattering Surface extraction Surface information Surfaces reconstruction |
URL | 查看原文 |
收录类别 | EI |
语种 | 英语 |
出版者 | IEEE Computer Society |
EI入藏号 | 20235115236874 |
EI主题词 | Optical tomography |
EI分类号 | 461.6 Medicine and Pharmacology ; 741.1 Light/Optics ; 741.3 Optical Devices and Systems ; 801.4 Physical Chemistry ; 802.3 Chemical Operations |
原始文献类型 | Journal article (JA) |
来源库 | IEEE |
文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/347962 |
专题 | 信息科学与技术学院 物质科学与技术学院 信息科学与技术学院_PI研究组_娄鑫组 物质科学与技术学院_博士生 信息科学与技术学院_硕士生 信息科学与技术学院_博士生 物质科学与技术学院_PI研究组_朱幸俊组 信息科学与技术学院_PI研究组_任无畏组 数学科学研究所_PI研究组(P)_姜嘉骅组 |
通讯作者 | Jiang, Jiahua; Ren, Wuwei |
作者单位 | 1.School of Information Science and Technology, ShanghaiTech University, Shanghai, China; 2.School of Physical Science and Technology, ShanghaiTech University, Shanghai, China; 3.Institute of Mathematical Science, ShanghaiTech University, Shanghai, China |
第一作者单位 | 信息科学与技术学院 |
通讯作者单位 | 上海科技大学; 信息科学与技术学院 |
第一作者的第一单位 | 信息科学与技术学院 |
推荐引用方式 GB/T 7714 | Gao, Shengyu,Zhang, Jianru,Hu, Yexing,et al. Multifunctional Optical Tomography System With High-Fidelity Surface Extraction Based on a Single Programmable Scanner and Unified Pinhole Modeling[J]. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING,2024,71(4):1391-1403. |
APA | Gao, Shengyu.,Zhang, Jianru.,Hu, Yexing.,Wu, Yanan.,Li, Linlin.,...&Ren, Wuwei.(2024).Multifunctional Optical Tomography System With High-Fidelity Surface Extraction Based on a Single Programmable Scanner and Unified Pinhole Modeling.IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING,71(4),1391-1403. |
MLA | Gao, Shengyu,et al."Multifunctional Optical Tomography System With High-Fidelity Surface Extraction Based on a Single Programmable Scanner and Unified Pinhole Modeling".IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING 71.4(2024):1391-1403. |
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