Swc4 protects nucleosome-free rDNA, tDNA and telomere loci to inhibit genome instability
2023-07-01
发表期刊DNA REPAIR (IF:3.0[JCR-2023],3.7[5-Year])
ISSN1568-7864
EISSN1568-7856
卷号127
发表状态已发表
DOI10.1016/j.dnarep.2023.103512
摘要

In the baker's yeast Saccharomyces cerevisiae, NuA4 and SWR1-C, two multisubunit complexes, are involved in histone acetylation and chromatin remodeling, respectively. Eaf1 is the assembly platform subunit of NuA4, Swr1 is the assembly platform and catalytic subunit of SWR1-C, while Swc4, Yaf9, Arp4 and Act1 form a functional module, and is present in both NuA4 and SWR1 complexes. ACT1 and ARP4 are essential for cell survival. Deletion of SWC4, but not YAF9, EAF1 or SWR1 results in a severe growth defect, but the underlying mechanism remains largely unknown. Here, we show that swc4 Delta, but not yaf9 Delta, eaf1 Delta, or swr1 Delta cells display defects in DNA ploidy and chromosome segregation, suggesting that the defects observed in swc4 Delta cells are independent of NuA4 or SWR1-C integrity. Swc4 is enriched in the nucleosome-free regions (NFRs) of the genome, including characteristic regions of RDN5s, tDNAs and telomeres, independently of Yaf9, Eaf1 or Swr1. In particular, rDNA, tDNA and telomere loci are more unstable and prone to recombination in the swc4 Delta cells than in wild-type cells. Taken together, we conclude that the chromatin associated Swc4 protects nucleosome-free chromatin of rDNA, tDNA and telomere loci to ensure genome integrity.

关键词Swc4 Nucleosome-free chromatin DNA recombination Genome instability
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收录类别SCI
语种英语
资助项目National Key Research and Development Program of China[2019YFA0109902] ; Shanghai Research Project[18JC1420202]
WOS研究方向Genetics & Heredity ; Toxicology
WOS类目Genetics & Heredity ; Toxicology
WOS记录号WOS:001010974500001
出版者ELSEVIER
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/316411
专题生命科学与技术学院
生命科学与技术学院_特聘教授组_周金秋组
生命科学与技术学院_博士生
通讯作者Liu, Jia-Cheng; Zhou, Jin-Qiu
作者单位
1.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China
2.Univ Chinese Acad Sci, Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, CAS Ctr Excellence Mol Cell Sci,State Key Lab Mol, Shanghai 200031, Peoples R China
3.Univ Chinese Acad Sci, Hangzhou Inst Adv Study, Sch Life Sci, Key Lab Syst Hlth Sci Zhejiang Prov, Hangzhou 310024, Peoples R China
第一作者单位生命科学与技术学院
通讯作者单位生命科学与技术学院
第一作者的第一单位生命科学与技术学院
推荐引用方式
GB/T 7714
Pan, Yue,Hu, Can,Hou, Lin-Jun,et al. Swc4 protects nucleosome-free rDNA, tDNA and telomere loci to inhibit genome instability[J]. DNA REPAIR,2023,127.
APA Pan, Yue.,Hu, Can.,Hou, Lin-Jun.,Chen, Yu-Long.,Shi, Jiantao.,...&Zhou, Jin-Qiu.(2023).Swc4 protects nucleosome-free rDNA, tDNA and telomere loci to inhibit genome instability.DNA REPAIR,127.
MLA Pan, Yue,et al."Swc4 protects nucleosome-free rDNA, tDNA and telomere loci to inhibit genome instability".DNA REPAIR 127(2023).
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