RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction
2021-05
发表期刊HUMAN GENETICS (IF:3.8[JCR-2023],4.5[5-Year])
ISSN0340-6717
EISSN1432-1203
卷号140期号:5页码:813-825
发表状态已发表
DOI10.1007/s00439-020-02247-y
摘要

Hirschsprung disease (HSCR) is a neurocristopathy characterized by the absence of enteric ganglia along variable lengths of the intestine. Genetic defects play a major role in HSCR pathogenesis with nearly 50% of patients having a structural or regulatory deficiency in the major susceptibility gene RET. However, complete molecular defects remain poorly characterized in most patients. Here, we performed detailed genetic, molecular, and populational investigations of rare null mutations and modifiers at the RET locus. We first verified the pathogenicity of three RET splice site mutants (c.1879 + 1G > A, c.2607 + 5G > A and c.2608-3C > G) at the RNA level. We also identified significantly higher risk allele (genotype) frequencies, and their over-transmission, from unaffected parents to affected offspring of three functionally independent enhancer variants (rs2506030, rs7069590 and rs2435357, with odd ratios (OR) of 2.09, 2.71 and 7.59, respectively, P < 0.001). These three common variants are in significant (P < 4.64 x 10(-186)) linkage disequilibrium in the Han Chinese population with similar to 60% of them carrying at least one copy and > 10% with two copies. We show that RET compound inheritance of rare and common variants prevails in 64% (seven out of 11) of Chinese HSCR families. This study supports the idea that common RET variants can modify the penetrance of rare null RET mutations in HSCR, and the combined high susceptibility allele dosage may constitute the unique raised "risk baseline" among the Chinese population.

收录类别SCI ; SCIE
语种英语
资助项目National Natural Science Foundation of China[81771620][82070532][81670469][81700451][91731303][31771388][31961130380][31711530221][81630039] ; Shanghai Municipal Commission of Health and Family Planning[201840028] ; National Science Fund for Distinguished Young Scholars[31525014] ; UK Royal SocietyNewton Advanced Fellowship[NAF\R1\191094] ; Key Research Program of Frontier Sciences of the Chinese Academy of Sciences[QYZDJ-SSW-SYS009] ; Shanghai Municipal Science and Technology Major Project[2017SHZDZX01] ; Shanghai Key Laboratory of Pediatric Gastroenterology and Nutrition[17DZ2272000] ; Public Welfare Industry Research Special Foundation of China[201402007]
WOS研究方向Genetics & Heredity
WOS类目Genetics & Heredity
WOS记录号WOS:000607359700001
出版者SPRINGER
原始文献类型Article
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/125040
专题生命科学与技术学院
生命科学与技术学院_特聘教授组_徐书华组
生命科学与技术学院_博士生
通讯作者Cai, Wei; Li, Long
作者单位
1.Capital Inst Pediat, Beijing Municipal Key Lab Child Dev & Nutri, Dept Med Genet, Beijing 100020, Peoples R China
2.Shanghai Jiao Tong Univ, Shanghai Inst Pediat Res, Shanghai Key Lab Pediat Gastroenterol & Nutr, Xinhua Hosp,Dept Pediat Surg,Sch Med, Shanghai 200092, Peoples R China
3.Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Chinese Acad Sci,Shanghai Inst Biol Sci, CAS MPG Partner Inst Computat Biol,Key Lab Comput, Shanghai 200031, Peoples R China
4.Affiliated Childrens Hosp, Dept Gen Surg, Capital Inst Pediat, 2 Yabao Rd, Beijing 100020, Peoples R China
5.Chinese Acad Sci, Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China
6.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China
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GB/T 7714
Jiang, Qian,Wang, Yang,Gao, Yang,et al. RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction[J]. HUMAN GENETICS,2021,140(5):813-825.
APA Jiang, Qian.,Wang, Yang.,Gao, Yang.,Wang, Hui.,Zhang, Zhen.,...&Li, Long.(2021).RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction.HUMAN GENETICS,140(5),813-825.
MLA Jiang, Qian,et al."RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction".HUMAN GENETICS 140.5(2021):813-825.
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