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RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction | |
2021-05 | |
发表期刊 | HUMAN GENETICS (IF:3.8[JCR-2023],4.5[5-Year]) |
ISSN | 0340-6717 |
EISSN | 1432-1203 |
卷号 | 140期号:5页码:813-825 |
发表状态 | 已发表 |
DOI | 10.1007/s00439-020-02247-y |
摘要 | Hirschsprung disease (HSCR) is a neurocristopathy characterized by the absence of enteric ganglia along variable lengths of the intestine. Genetic defects play a major role in HSCR pathogenesis with nearly 50% of patients having a structural or regulatory deficiency in the major susceptibility gene RET. However, complete molecular defects remain poorly characterized in most patients. Here, we performed detailed genetic, molecular, and populational investigations of rare null mutations and modifiers at the RET locus. We first verified the pathogenicity of three RET splice site mutants (c.1879 + 1G > A, c.2607 + 5G > A and c.2608-3C > G) at the RNA level. We also identified significantly higher risk allele (genotype) frequencies, and their over-transmission, from unaffected parents to affected offspring of three functionally independent enhancer variants (rs2506030, rs7069590 and rs2435357, with odd ratios (OR) of 2.09, 2.71 and 7.59, respectively, P < 0.001). These three common variants are in significant (P < 4.64 x 10(-186)) linkage disequilibrium in the Han Chinese population with similar to 60% of them carrying at least one copy and > 10% with two copies. We show that RET compound inheritance of rare and common variants prevails in 64% (seven out of 11) of Chinese HSCR families. This study supports the idea that common RET variants can modify the penetrance of rare null RET mutations in HSCR, and the combined high susceptibility allele dosage may constitute the unique raised "risk baseline" among the Chinese population. |
收录类别 | SCI ; SCIE |
语种 | 英语 |
资助项目 | National Natural Science Foundation of China[81771620][82070532][81670469][81700451][91731303][31771388][31961130380][31711530221][81630039] ; Shanghai Municipal Commission of Health and Family Planning[201840028] ; National Science Fund for Distinguished Young Scholars[31525014] ; UK Royal SocietyNewton Advanced Fellowship[NAF\R1\191094] ; Key Research Program of Frontier Sciences of the Chinese Academy of Sciences[QYZDJ-SSW-SYS009] ; Shanghai Municipal Science and Technology Major Project[2017SHZDZX01] ; Shanghai Key Laboratory of Pediatric Gastroenterology and Nutrition[17DZ2272000] ; Public Welfare Industry Research Special Foundation of China[201402007] |
WOS研究方向 | Genetics & Heredity |
WOS类目 | Genetics & Heredity |
WOS记录号 | WOS:000607359700001 |
出版者 | SPRINGER |
原始文献类型 | Article |
引用统计 | 正在获取...
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文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/125040 |
专题 | 生命科学与技术学院 生命科学与技术学院_特聘教授组_徐书华组 生命科学与技术学院_博士生 |
通讯作者 | Cai, Wei; Li, Long |
作者单位 | 1.Capital Inst Pediat, Beijing Municipal Key Lab Child Dev & Nutri, Dept Med Genet, Beijing 100020, Peoples R China 2.Shanghai Jiao Tong Univ, Shanghai Inst Pediat Res, Shanghai Key Lab Pediat Gastroenterol & Nutr, Xinhua Hosp,Dept Pediat Surg,Sch Med, Shanghai 200092, Peoples R China 3.Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Chinese Acad Sci,Shanghai Inst Biol Sci, CAS MPG Partner Inst Computat Biol,Key Lab Comput, Shanghai 200031, Peoples R China 4.Affiliated Childrens Hosp, Dept Gen Surg, Capital Inst Pediat, 2 Yabao Rd, Beijing 100020, Peoples R China 5.Chinese Acad Sci, Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China 6.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China |
推荐引用方式 GB/T 7714 | Jiang, Qian,Wang, Yang,Gao, Yang,et al. RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction[J]. HUMAN GENETICS,2021,140(5):813-825. |
APA | Jiang, Qian.,Wang, Yang.,Gao, Yang.,Wang, Hui.,Zhang, Zhen.,...&Li, Long.(2021).RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction.HUMAN GENETICS,140(5),813-825. |
MLA | Jiang, Qian,et al."RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction".HUMAN GENETICS 140.5(2021):813-825. |
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