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Identification of key genes associated with persistent immune changes and secondary immune activation responses induced by influenza vaccination after COVID-19 recovery by machine learning methods
期刊论文
COMPUTERS IN BIOLOGY AND MEDICINE, 2024, 卷号: 169
作者:
Ren, Jingxin
;
Zhou, XianChao
;
Huang, Ke
;
Chen, Lei
;
Guo, Wei
Adobe PDF(8347Kb)
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收藏
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浏览/下载:307/0
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提交时间:2024/01/19
Blood
Chemical activation
Gene expression
Machine learning
Patient treatment
Recovery
Vaccines
Blood samples
COVID-19 recovery
Genes expression
Healthy controls
Immune activation
Immune change
Influenza vaccines
Machine learning methods
Machine-learning
Sample sets
scICML: Information-Theoretic Co-Clustering-Based Multi-View Learning for the Integrative Analysis of Single-Cell Multi-Omics Data
期刊论文
IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2024, 卷号: 21, 期号: 1, 页码: 200-207
作者:
Zeng, Pengcheng
;
Lin, Zhixiang
Adobe PDF(1032Kb)
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浏览/下载:286/44
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提交时间:2024/03/08
Clustering
multi-view learning
single-cell multi-omics integration
Bioinformatics
Cytology
Data integration
Gene expression
Information analysis
Information theory
Pattern matching
'omics'
Clusterings
Genes expression
Genomics
Multi-view learning
Mutual informations
Optimisations
Pattern-matching
Single cells
Single-cell multi-omic integration
Deep-learning–assisted Sort-Seq enables high-throughput profiling of gene expression characteristics with high precision
期刊论文
SCIENCE ADVANCES, 2023, 卷号: 9, 期号: 45
作者:
Feng, Huibao
;
Li, Fan
;
Wang, Tianmin
;
Xing, Xin-Hui
;
Zeng, An-Ping
Adobe PDF(1888Kb)
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浏览/下载:293/0
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提交时间:2024/05/11
Binding sites
Deep learning
Transcription
Cellular behaviors
Clonal population
Genes expression
High-precision
High-throughput
Intracellular proteins
Noise production
Nonlinear nature
Quantitative description
Steady state
Synthesis of Glycolate by Bacillus subtilis through Glyoxylate Bypass Pathway
期刊论文
SCIENCE AND TECHNOLOGY OF FOOD INDUSTRY, 2023, 卷号: 44, 期号: 20, 页码: 143-151
作者:
Liu, Yufei
;
Fu, Cong
;
Xie, Yukang
;
Shi, Jiping
;
Sun, Junsong
Adobe PDF(2285Kb)
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浏览/下载:333/0
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提交时间:2024/04/12
Bacteriology
Biochemistry
Genes
Glycerol
Metabolic engineering
Metabolism
Strain
Substrates
B.subtilis
Bacillus Subtilis
Food safes
Glycolates
Glyoxylate
Glyoxylate bypass pathway
Heterologous expression
Homologous recombination
Intermediate substrates
Isocitrate lyase
A guidebook of spatial transcriptomic technologies, data resources and analysis approaches
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 卷号: 21, 页码: 940-955
作者:
Yue, Liangchen
;
Liu, Feng
;
Hu, Jiongsong
;
Yang, Pin
;
Wang, Yuxiang
Adobe PDF(5611Kb)
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浏览/下载:270/0
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提交时间:2023/03/17
Diagnosis
Disease control
Gene expression
Analysis approach
Cellular genes
Data resources
Disease diagnosis
Genes expression
Multicellular organisms
Single cells
Spatial transcriptomic technology
Technology data
Transcriptomics
Zfp57 Exerts Maternal and Sexually Dimorphic Effects on Genomic Imprinting
期刊论文
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2022, 卷号: 10
作者:
Xu, Zhen
;
Shi, Jiajia
;
Zhang, Yu
;
Liu, Yuhan
;
Zhao, Junzheng
Adobe PDF(4665Kb)
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浏览/下载:1041/262
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提交时间:2022/05/18
genomic imprinting
imprinting control region (ICR)
imprinted genes
maternal effect
gender
sexually dimorphic
allelic expression
RNA-seq
WGBS
bisulfite sequencing
Transcriptome analysis method based on differential distribution evaluation
期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022
作者:
Meng, Yiwei
;
Huang, Yanhong
;
Chang, Xiao
;
Liu, Xiaoping
;
Chen, Luonan
Adobe PDF(1613Kb)
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浏览/下载:332/0
|
提交时间:2022/03/23
gene expression
differential distribution genes
cancer subtyping
single-cell clustering
disease early-warning signals
potential disease modules
A novel copper-sensing two-component system for inducing Dsb gene expression in bacteria
期刊论文
SCIENCE BULLETIN, 2022, 卷号: 67, 期号: 2
作者:
Yu, Liang
;
Cao, Qiao
;
Chen, Weizhong
;
Yang, Nana
;
Yang, Cai-Guang
Adobe PDF(5408Kb)
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浏览/下载:532/237
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提交时间:2021/12/17
Amino acids
Copper
Covalent bonds
Metal ions
Phosphatases
Sulfur compounds
Transcription
Copper resistance
Copper toxicity
Disulfide bond formation
Gene-regulation
Genes expression
Histidine kinase
Human pathogens
Pseudomonas aeruginosa
Response regulators
Two component systems
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