Developing safe and efficient CGBE editor based on Cas-embedding strategy
2025
发表期刊SYNTHETIC AND SYSTEMS BIOTECHNOLOGY (IF:4.4[JCR-2023],4.3[5-Year])
ISSN2405-805X
卷号10期号:2
发表状态已发表
DOI10.1016/j.synbio.2025.02.001
摘要

CGBE (C-to-G base editor) systems, pivotal components within the base editing arsenal, enable the precise conversion of cytosines to guanines. However, conventional cytidine deaminases possess non-specific single- stranded DNA binding properties, leading to off-target effects and safety concerns. The Cas-embedding strategy, which involves embedding functional proteins like deaminases within the Cas9 enzyme's architecture, emerges as a method to mitigate these off-target effects. Our study pioneers the application of the Cas-embedding strategy to CGBE systems, engineering a suite of novel CGBE editors, CE-CGBE. The CE-CGBE that incorporated eA3A, RBMX and Udgx excelled in editing efficiency, editing purity, and indel formation was named HF-CGBE. HFCGBE showed no significant difference in off-target effects compared to the negative control group for both DNA and RNA. In summary, the novel HF-CGBE editors we propose expand the base editing toolbox and provide therapeutic approaches for related pathogenic mutations.

关键词CGBE Cas-embedding Off-target eA3A
URL查看原文
收录类别SCI
语种英语
资助项目National Nat-ural Science Foundation of China[82302497]
WOS研究方向Biotechnology & Applied Microbiology
WOS类目Biotechnology & Applied Microbiology
WOS记录号WOS:001427650300001
出版者KEAI PUBLISHING LTD
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/493500
专题生命科学与技术学院
生命科学与技术学院_PI研究组_池天组
生命科学与技术学院_PI研究组_黄行许组
生命科学与技术学院_博士生
通讯作者Shi, Ming
作者单位
1.Xuzhou Med Univ, Canc Inst, 209 Tongshan Rd, Xuzhou 221004, Jiangsu, Peoples R China
2.Xuzhou Med Univ, Ctr Clin Oncol, Affiliated Hosp, 99 Huaihai Rd, Xuzhou 221002, Jiangsu, Peoples R China
3.Xuzhou Med Univ, Jiangsu Ctr Collaborat & Innovat Canc Biotherapy, 209 Tongshan Rd, Xuzhou 221004, Jiangsu, Peoples R China
4.ShanghaiTech Univ, Gene Editing Ctr, Sch Life Sci & Technol, Shanghai 201210, Peoples R China
5.Shanghai Inst Biomed & Pharmaceut Technol, Shanghai 200032, Peoples R China
推荐引用方式
GB/T 7714
Lin, Tian,Wang, Xin,Zhang, Yu,et al. Developing safe and efficient CGBE editor based on Cas-embedding strategy[J]. SYNTHETIC AND SYSTEMS BIOTECHNOLOGY,2025,10(2).
APA Lin, Tian,Wang, Xin,Zhang, Yu,Li, Guanglei,Huang, Xingxu,&Shi, Ming.(2025).Developing safe and efficient CGBE editor based on Cas-embedding strategy.SYNTHETIC AND SYSTEMS BIOTECHNOLOGY,10(2).
MLA Lin, Tian,et al."Developing safe and efficient CGBE editor based on Cas-embedding strategy".SYNTHETIC AND SYSTEMS BIOTECHNOLOGY 10.2(2025).
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