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Structure and biochemical characterization of L-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of L-2-hydroxyglutaric aciduria
2024-01
发表期刊JOURNAL OF BIOLOGICAL CHEMISTRY (IF:4.0[JCR-2023],4.4[5-Year])
ISSN0021-9258
EISSN1083-351X
卷号300期号:1
发表状态已发表
DOI10.1016/j.jbc.2023.105491
摘要

L-2-hydroxyglutarate dehydrogenase (L2HGDH) is a mitochondrial membrane–associated metabolic enzyme, which catalyzes the oxidation of L-2-hydroxyglutarate (L-2-HG) to 2-oxoglutarate (2-OG). Mutations in human L2HGDH lead to abnormal accumulation of L-2-HG, which causes a neurometabolic disorder named L-2-hydroxyglutaric aciduria (L-2-HGA). Here, we report the crystal structures of Drosophila melanogaster L2HGDH (dmL2HGDH) in FAD-bound form and in complex with FAD and 2-OG and show that dmL2HGDH exhibits high activity and substrate specificity for L-2-HG. dmL2HGDH consists of an FAD-binding domain and a substrate-binding domain, and the active site is located at the interface of the two domains with 2-OG binding to the re-face of the isoalloxazine moiety of FAD. Mutagenesis and activity assay confirmed the functional roles of key residues involved in the substrate binding and catalytic reaction and showed that most of the mutations of dmL2HGDH equivalent to L-2-HGA-associated mutations of human L2HGDH led to complete loss of the activity. The structural and biochemical data together reveal the molecular basis for the substrate specificity and catalytic mechanism of L2HGDH and provide insights into the functional roles of human L2HGDH mutations in the pathogeneses of L-2-HGA. © 2023 The Authors

关键词Catalyst activity Mitochondria 2-hydroxyglutaric aciduria 2-oxoglutarate Biochemical characterization Catalytic mechanisms Drosophilla melanogaster L-2-hydroxyglutarate dehydrogenase Mitochondrial membranes Protein crystallography Structure characterization Substrate specificity
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收录类别EI ; SCI
语种英语
资助项目Chinese Academy of Sciences[XDB37030305] ; National Natural Science Foun-dation of China[32071190]
WOS研究方向Biochemistry & Molecular Biology
WOS类目Biochemistry & Molecular Biology
WOS记录号WOS:001407135000001
出版者American Society for Biochemistry and Molecular Biology Inc.
EI入藏号20235015218920
EI主题词Catalysis
EI分类号461.2 Biological Materials and Tissue Engineering ; 802.2 Chemical Reactions ; 803 Chemical Agents and Basic Industrial Chemicals ; 804 Chemical Products Generally
原始文献类型Journal article (JA)
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/348626
专题生命科学与技术学院
生命科学与技术学院_特聘教授组_丁建平组
通讯作者Ding, Jianping
作者单位
1.State Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai, China
2.School of Life Science and Technology, ShanghaiTech University, Shanghai, China
通讯作者单位生命科学与技术学院
推荐引用方式
GB/T 7714
Yang, Jun,Chen, Xingchen,Jin, Shan,et al. Structure and biochemical characterization of L-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of L-2-hydroxyglutaric aciduria[J]. JOURNAL OF BIOLOGICAL CHEMISTRY,2024,300(1).
APA Yang, Jun,Chen, Xingchen,Jin, Shan,&Ding, Jianping.(2024).Structure and biochemical characterization of L-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of L-2-hydroxyglutaric aciduria.JOURNAL OF BIOLOGICAL CHEMISTRY,300(1).
MLA Yang, Jun,et al."Structure and biochemical characterization of L-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of L-2-hydroxyglutaric aciduria".JOURNAL OF BIOLOGICAL CHEMISTRY 300.1(2024).
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