Quantum molecular dynamics simulations of the effect of secondary modes on the photoisomerization of a retinal chromophore model
2023-07-01
发表期刊EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS (IF:2.6[JCR-2023],2.5[5-Year])
ISSN1951-6355
EISSN1951-6401
发表状态已发表
DOI10.1140/epjs/s11734-023-00923-4
摘要

In this paper, we report on the performance of various quantum molecular dynamics simulation methods in describing the photo-induced nonadiabatic dynamics underlying the isomerization process of the retinal chromophore in rhodopsin. We focus on purely quantum vibronic wavepacket techniques and on various trajectory-based schemes, discussing their capability of accurately capture the isomerization process using a two-dimensional two-state model system coupled to an environment of secondary harmonic modes. Numerical results of various algorithms and time-independent grid schemes for the purely quantum approaches are presented, which also serve as benchmark for the trajectory-based calculations. Independent-trajectory and coupled-trajectory methods are compared as well, devoting particular attention to the scaling of their computational cost when increasing the number of degrees of freedom.

URL查看原文
收录类别SCI
语种英语
资助项目French Agence Nationale de la Recherche[ANR-20-CE29-0014]
WOS研究方向Physics
WOS类目Physics, Multidisciplinary
WOS记录号WOS:001038577000002
出版者SPRINGER HEIDELBERG
引用统计
正在获取...
文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/321452
专题大科学中心_PI研究组_江玉海组
通讯作者Lauvergnat, David; Agostini, Federica
作者单位
1.Univ Paris Saclay, Inst Chim Phys, CNRS, UMR CNRS 8000, F-91405 Orsay, France
2.Birla Inst Technol & Sci Pilani, Dept Chem, K K Birla Goa Campus, Pilani 403726, Goa, India
3.ShanghaiTech Univ, Ctr Transformat Sci, Shanghai 201210, Peoples R China
推荐引用方式
GB/T 7714
Pereira, Ari,Knapik, Joachim,Chen, Ahai,et al. Quantum molecular dynamics simulations of the effect of secondary modes on the photoisomerization of a retinal chromophore model[J]. EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS,2023.
APA Pereira, Ari,Knapik, Joachim,Chen, Ahai,Lauvergnat, David,&Agostini, Federica.(2023).Quantum molecular dynamics simulations of the effect of secondary modes on the photoisomerization of a retinal chromophore model.EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS.
MLA Pereira, Ari,et al."Quantum molecular dynamics simulations of the effect of secondary modes on the photoisomerization of a retinal chromophore model".EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS (2023).
条目包含的文件
文件名称/大小 文献类型 版本类型 开放类型 使用许可
个性服务
查看访问统计
谷歌学术
谷歌学术中相似的文章
[Pereira, Ari]的文章
[Knapik, Joachim]的文章
[Chen, Ahai]的文章
百度学术
百度学术中相似的文章
[Pereira, Ari]的文章
[Knapik, Joachim]的文章
[Chen, Ahai]的文章
必应学术
必应学术中相似的文章
[Pereira, Ari]的文章
[Knapik, Joachim]的文章
[Chen, Ahai]的文章
相关权益政策
暂无数据
收藏/分享
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。