Structure and engineering of miniature Acidibacillus sulfuroxidans Cas12f1
2023
发表期刊NATURE CATALYSIS (IF:42.8[JCR-2023],47.0[5-Year])
ISSN2520-1158
EISSN2520-1158
卷号6期号:8页码:695-709
发表状态已发表
DOI10.1038/s41929-023-00995-4
摘要

The miniature CRISPR-Cas12f nucleases enable efficient delivery via cargo-size-limited vehicles, thereby showing promise for in vivo therapeutic applications. Acidibacillus sulfuroxidans Cas12f1 (AsCas12f1, 422 amino acids) is one of the most compact Cas12f nucleases and exhibits moderate genome-editing activity in human cells compared with Cas9 and Cas12a. Understanding the mechanisms of why such a compact nuclease is active for genome editing would facilitate its rational engineering. Here we show the cryo-electron microscopy structure of the AsCas12f1–sgRNA–dsDNA ternary complex, and reveal that AsCas12f1 functions as an asymmetric dimer for sgRNA binding and DNA targeting. The mechanisms of dimer formation, protospacer adjacent motif recognition and sgRNA accommodation are elucidated. Based on these findings, we extensively engineer this system and have produced an evolved AsCas12f1–sgRNA combination with drastically enhanced genome-editing activity in human cells. These results provide further understanding of compact CRISPR systems and expand the mini CRISPR toolbox for therapeutic applications. [Figure not available: see fulltext.]. © 2023, The Author(s), under exclusive licence to Springer Nature Limited.

关键词Electron microscopy Amino-acids Asymmetric dimers Cryo-electron microscopy Dimer formation Human cells In-vivo Motif recognition Ternary complex Therapeutic Application
收录类别SCIE
语种英语
出版者Nature Research
EI入藏号20233114470150
EI主题词Electron microscopes
原始文献类型Article in Press
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/319437
专题物质科学与技术学院
生命科学与技术学院
生命科学与技术学院_PI研究组_黄行许组
物质科学与技术学院_PI研究组_季泉江组
物质科学与技术学院_硕士生
生命科学与技术学院_博士生
物质科学与技术学院_博士生
共同第一作者Liu, Dongliang; Pan, Deng
通讯作者Shen, Huaizong; Ji, Quanjiang
作者单位
1.School of Physical Science and Technology, ShanghaiTech University, Shanghai, China;
2.Key Laboratory of Structural Biology of Zhejiang Province, School of Life Sciences, Westlake University, Hangzhou, China;
3.Westlake Laboratory of Life Sciences and Biomedicine, Hangzhou, China;
4.Department of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, United Kingdom;
5.Gene Editing Center, School of Life Science and Technology, ShanghaiTech University, Shanghai, China;
6.Guangzhou Laboratory, Guangzhou, China
第一作者单位物质科学与技术学院
通讯作者单位物质科学与技术学院;  生命科学与技术学院
第一作者的第一单位物质科学与技术学院
推荐引用方式
GB/T 7714
Wu, Zhaowei,Liu, Dongliang,Pan, Deng,et al. Structure and engineering of miniature Acidibacillus sulfuroxidans Cas12f1[J]. NATURE CATALYSIS,2023,6(8):695-709.
APA Wu, Zhaowei.,Liu, Dongliang.,Pan, Deng.,Yu, Haopeng.,Shi, Jin.,...&Ji, Quanjiang.(2023).Structure and engineering of miniature Acidibacillus sulfuroxidans Cas12f1.NATURE CATALYSIS,6(8),695-709.
MLA Wu, Zhaowei,et al."Structure and engineering of miniature Acidibacillus sulfuroxidans Cas12f1".NATURE CATALYSIS 6.8(2023):695-709.
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