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Predicting Synthetic Lethality in Human Cancers via Multi-Graph Ensemble Neural Network
会议论文
2021 43RD ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE & BIOLOGY SOCIETY (EMBC), null,null,ELECTR NETWORK, NOV 01-05, 2021
Authors:
Mincai Lai
;
Guangyao Chen
;
Haochen Yang
;
Jingkang Yang
;
Zhihao Jiang
Adobe PDF(211Kb)
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View/Download:50/0
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Submit date:2021/12/18
结合可量化因素及不可量化因素判断的坐姿检测方法及系统
专利
申请号:CN202110944329.3,申请日期: 2021-08-17,类型:发明申请,状态:实质审查
Inventors:
郑杰
;
乌鑫亮
;
王丽
Adobe PDF(677Kb)
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Submit date:2021/11/16
基于知识图谱的合成致死基因对预测方法、系统、终端及介质
专利
申请号:CN202110638513.5,申请日期: 2021-06-08,类型:发明申请,状态:实质审查
Inventors:
郑杰
;
吴敏
;
刘勇
;
王诗珂
;
徐凡
Adobe PDF(699Kb)
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Submit date:2021/08/29
Velo-Predictor: An Ensemble Learning Pipeline for RNA Velocity Prediction
会议论文
THE 19TH ASIA PACIFIC BIOINFORMATICS CONFERENCE
Authors:
Wang X(王莘)
;
Zheng J(郑杰)
Adobe PDF(2324Kb)
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Submit date:2021/06/02
RNA velocity
Single cell
Ensemble learning
Landscape
Velo-Predictor: an ensemble learning pipeline for RNA velocity prediction
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 10
Authors:
Wang, Xin
;
Zheng, Jie
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View/Download:53/16
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Submit date:2021/09/30
RNA velocity
Single cell
Ensemble learning
Landscape
PIKE-R2P: Protein-protein interaction network-based knowledge embedding with graph neural network for single-cell RNA to protein prediction
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 6
Authors:
Dai, Xinnan
;
Xu, Fan
;
Wang, Shike
;
Mundra, Piyushkumar A.
;
Zheng, Jie
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Adobe PDF(3880Kb)
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View/Download:74/17
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Submit date:2021/06/18
Single-cell
Protein prediction
Graph neural network
Knowledge embedding
Cells
Cytology
Embeddings
Forecasting
Machine learning
Proteins
RNA
Graph neural networks
Machine learning methods
Machine learning models
Prediction performance
Protein interaction
Protein interaction networks
Simultaneous measurement
KG4SL: knowledge graph neural network for synthetic lethality prediction in human cancers
期刊论文
BIOINFORMATICS, 2021, 卷号: 37, 页码: I418-I425
Authors:
Wang, Shike
;
Xu, Fan
;
Li, Yunyang
;
Wang, Jie
;
Zhang, Ke
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Adobe PDF(469Kb)
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View/Download:61/25
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Submit date:2021/09/30
Therapeutic targeting of the mitochondrial one-carbon pathway: perspectives, pitfalls, and potential
期刊论文
ONCOGENE, 2021
Authors:
Zhao, Li Na
;
Bjorklund, Mikael
;
Caldez, Matias J.
;
Zheng, Jie
;
Kaldis, Philipp
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View/Download:35/0
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Submit date:2021/04/19
Graph contextualized attention network for predicting synthetic lethality in human cancers
期刊论文
BIOINFORMATICS, 2021, 卷号: 37, 期号: 16, 页码: 2432-2440
Authors:
Long, Yahui
;
Wu, Min
;
Liu, Yong
;
Zheng, Jie
;
Kwoh, Chee Keong
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Submit date:2021/10/15
Ensemble learning models that predict surface protein abundance from single-cell multimodal omics data
期刊论文
METHODS, 2021, 卷号: 189, 页码: 65-73
Authors:
Xu, Fan
;
Wang, Shike
;
Dai, Xinnan
;
Mundra, Piyushkumar A.
;
Zheng, Jie
Adobe PDF(1954Kb)
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View/Download:78/2
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Submit date:2021/04/23
Single cell
Ensemble learning
Protein abundance
Transcriptomic
CITE-seq
REAP-seq