TMM-Nets: Transferred Multi- to Mono-Modal Generation for Lupus Retinopathy Diagnosis
2023-04-01
发表期刊IEEE TRANSACTIONS ON MEDICAL IMAGING (IF:8.9[JCR-2023],11.3[5-Year])
ISSN0278-0062
EISSN1558-254X
卷号42期号:4页码:1083-1094
发表状态已发表
DOI10.1109/TMI.2022.3223683
摘要

Rare diseases, which are severely underrepresented in basic and clinical research, can particularly benefit from machine learning techniques. However, current learning-based approaches usually focus on either mono-modal image data or matched multi-modal data, whereas the diagnosis of rare diseases necessitates the aggregation of unstructured and unmatched multi-modal image data due to their rare and diverse nature. In this study, we therefore propose diagnosis-guided multi-to-mono modal generation networks (TMM-Nets) along with training and testing procedures. TMM-Nets can transfer data from multiple sources to a single modality for diagnostic data structurization. To demonstrate their potential in the context of rare diseases, TMM-Nets were deployed to diagnose the lupus retinopathy (LR-SLE), leveraging unmatched regular and ultra-wide-field fundus images for transfer learning. The TMM-Nets encoded the transfer learning from diabetic retinopathy to LR-SLE based on the similarity of the fundus lesions. In addition, a lesion-aware multi-scale attention mechanism was developed for clinical alerts, enabling TMM-Nets not only to inform patient care, but also to provide insights consistent with those of clinicians. An adversarial strategy was also developed to refine multi- to mono-modal image generation based on diagnostic results and the data distribution to enhance the data augmentation performance. Compared to the baseline model, the TMM-Nets showed 35.19% and 33.56% F1 score improvements on the test and external validation sets, respectively. In addition, the TMM-Nets can be used to develop diagnostic models for other rare diseases. © 1982-2012 IEEE.

关键词Clinical research Diseases Eye protection Image enhancement Learning systems Medical imaging Modal analysis Biomedical imaging Generating adversarial training Images synthesis Lesion Lupus retinopathy Multi-modal data Retinopathy Transfer learning Unmatched multi-modal data UWF-FFA UWF-FP
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收录类别SCI ; EI
语种英语
资助项目National Natural Science Foundation of China[
WOS研究方向Computer Science ; Engineering ; Imaging Science & Photographic Technology ; Radiology, Nuclear Medicine & Medical Imaging
WOS类目Computer Science, Interdisciplinary Applications ; Engineering, Biomedical ; Engineering, Electrical & Electronic ; Imaging Science & Photographic Technology ; Radiology, Nuclear Medicine & Medical Imaging
WOS记录号WOS:000964765000016
出版者Institute of Electrical and Electronics Engineers Inc.
EI入藏号20225113272006
EI主题词Diagnosis
EI分类号461.1 Biomedical Engineering ; 461.6 Medicine and Pharmacology ; 746 Imaging Techniques ; 914.1 Accidents and Accident Prevention ; 921 Mathematics
原始文献类型Journal article (JA)
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/294860
专题生物医学工程学院_PI研究组_沈定刚组
通讯作者Li, Jing; Sheng, Bin
作者单位
1.Shanghai Jiao Tong Univ, Dept Comp Sci & Engn, Shanghai 200240, Peoples R China
2.Shanghai Jiao Tong Univ, Renji Hosp, Sch Med, Dept Ophthalmol, Shanghai 200127, Peoples R China
3.Shanghai Jiao Tong Univ Affiliated Peoples Hosp 6, Shanghai Diabet Inst, Shanghai Clin Ctr Diabet, Shanghai 200233, Peoples R China
4.Ohio State Univ, Dept Comp Sci & Engn, Columbus, OH 43210 USA
5.Ohio State Univ, Dept Biomed Informat, Columbus, OH 43210 USA
6.Shanghai Jiao Tong Univ, AI Inst, MoE Key Lab Artificial Intelligence, Shanghai 200240, Peoples R China
7.ShanghaiTech Univ, Sch Biomed Engn, Shanghai 201210, Peoples R China
8.Shanghai United Imaging Intelligence Co Ltd, Shanghai 200230, Peoples R China
9.Shanghai Clin Res & Trial Ctr, Shanghai 201210, Peoples R China
推荐引用方式
GB/T 7714
Liu, Ruhan,Wang, Tianqin,Li, Huating,et al. TMM-Nets: Transferred Multi- to Mono-Modal Generation for Lupus Retinopathy Diagnosis[J]. IEEE TRANSACTIONS ON MEDICAL IMAGING,2023,42(4):1083-1094.
APA Liu, Ruhan.,Wang, Tianqin.,Li, Huating.,Zhang, Ping.,Li, Jing.,...&Sheng, Bin.(2023).TMM-Nets: Transferred Multi- to Mono-Modal Generation for Lupus Retinopathy Diagnosis.IEEE TRANSACTIONS ON MEDICAL IMAGING,42(4),1083-1094.
MLA Liu, Ruhan,et al."TMM-Nets: Transferred Multi- to Mono-Modal Generation for Lupus Retinopathy Diagnosis".IEEE TRANSACTIONS ON MEDICAL IMAGING 42.4(2023):1083-1094.
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