Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition

doi:10.1093/nar/gkw126

	Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition
	Chang, Hongyuan 1,2; Liu, Yuwei 1; Xue, Mengzhu 1; Liu, Haiyue 2,3; Du, Shaowei 1,4; Zhang, Liwen1,2,5,6 ; Wang, Peng1,2,6
	2016-04-07
发表期刊	NUCLEIC ACIDS RESEARCH
ISSN	0305-1048
卷号	44 期号:6 页码:2514-2527
发表状态	已发表
DOI	10.1093/nar/gkw126
摘要	Epithelial-to-mesenchymal transition (EMT) is a complex multistep process in which phenotype switches are mediated by a network of transcription factors (TFs). Systematic characterization of all dynamic TFs controlling EMT state transitions, especially for the intermediate partial-EMT state, represents a highly relevant yet largely unexplored task. Here, we performed a computational analysis that integrated time-course EMT transcriptomic data with public cistromic data and identified three synergistic master TFs (ETS2, HNF4A and JUNB) that regulate the transition through the partial-EMT state. Overexpression of these regulators predicted a poor clinical outcome, and their elimination readily abolished TGF-beta-induced EMT. Importantly, these factors utilized a clique motif, physically interact and their cumulative binding generally characterized EMT-associated genes. Furthermore, analyses of H3K27ac ChIP-seq data revealed that ETS2, HNF4A and JUNB are associated with super-enhancers and the administration of BRD4 inhibitor readily abolished TGF-beta-induced EMT. These findings have implications for systematic discovery of master EMT regulators and super-enhancers as novel targets for controlling metastasis.
收录类别	SCI
语种	英语
资助项目	Science and Technology Commission of Shanghai Municipality[12DZ1910800]
WOS研究方向	Biochemistry & Molecular Biology
WOS类目	Biochemistry & Molecular Biology
WOS记录号	WOS:000374570500014
出版者	OXFORD UNIV PRESS
WOS关键词	TGF-BETA ; SUPER-ENHANCERS ; REGULATORY NETWORKS ; CELL-MIGRATION ; CANCER ; EXPRESSION ; PROGRESSION ; METASTASIS ; INHIBITION ; ACTIVATION
原始文献类型	Article
引用统计
文献类型	期刊论文
条目标识符	https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/1874
专题	生命科学与技术学院生命科学与技术学院_特聘教授组_王鹏组生命科学与技术学院_硕士生
通讯作者	Wang, Peng
作者单位	1.Chinese Acad Sci, Shanghai Adv Res Inst, Lab Syst Biol, 100 Haike Rd,Zhangjiang High Tech Pk, Shanghai 201210, Peoples R China 2.Univ Chinese Acad Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China 3.Chinese Acad Sci, Shanghai Inst Biol Sci, Shanghai Inst Biochem & Cell Biol, 320 Yueyang Rd, Shanghai 200031, Peoples R China 4.Shanghai Univ, Sch Life Sci, 333 Nanchen Rd, Shanghai 200444, Peoples R China 5.Chinese Acad Sci, Shanghai Inst Mat Med, 555 Zu Chong Zhi Rd,Zhangjiang High Tech Pk, Shanghai 201203, Peoples R China 6.ShanghaiTech Univ, Sch Life Sci & Technol, 100 Haike Rd,Zhangjiang High Tech Pk, Shanghai 201210, Peoples R China
通讯作者单位	生命科学与技术学院
推荐引用方式 GB/T 7714	Chang, Hongyuan,Liu, Yuwei,Xue, Mengzhu,et al. Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition[J]. NUCLEIC ACIDS RESEARCH,2016,44(6):2514-2527.
APA	Chang, Hongyuan.,Liu, Yuwei.,Xue, Mengzhu.,Liu, Haiyue.,Du, Shaowei.,...&Wang, Peng.(2016).Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition.NUCLEIC ACIDS RESEARCH,44(6),2514-2527.
MLA	Chang, Hongyuan,et al."Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition".NUCLEIC ACIDS RESEARCH 44.6(2016):2514-2527.