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Common feature learning for brain tumor MRI synthesis by context-aware generative adversarial network
2022-07
发表期刊MEDICAL IMAGE ANALYSIS (IF:10.7[JCR-2023],11.9[5-Year])
ISSN1361-8415
EISSN1361-8423
卷号79
发表状态已发表
DOI10.1016/j.media.2022.102472
摘要

Multi-modal structural Magnetic Resonance Image (MRI) provides complementary information and has been used widely for diagnosis and treatment planning of gliomas. While machine learning is popularly adopted to process and analyze MRI images, most existing tools are based on complete sets of multi-modality images that are costly and sometimes impossible to acquire in real clinical scenarios. In this work, we address the challenge of multi-modality glioma MRI synthesis often with incomplete MRI modalities. We propose 3D Common-feature learning-based Context-aware Generative Adversarial Network (CoCa-GAN) for this purpose. In particular, our proposed CoCa-GAN method adopts the encoder-decoder architecture to map the input modalities into a common feature space by the encoder, from which (1) the missing target modality(-ies) can be synthesized by the decoder, and also (2) the jointly conducted segmentation of the gliomas can help the synthesis task to better focus on the tumor regions. The synthesis and segmentation tasks share the same common feature space, while multi-task learning boosts both their performances. In particular, for the encoder to derive the common feature space, we propose and validate two different models, i.e., (1) early-fusion CoCa-GAN (eCoCa-GAN) and (2) intermediate-fusion CoCa-GAN (iCoCa-GAN). The experimental results demonstrate that the proposed iCoCa-GAN outperforms other state-of-the-art methods in synthesis of missing image modalities. Moreover, our method is flexible to handle the arbitrary combination of input/output image modalities, which makes it feasible to process brain tumor MRI data in real clinical circumstances. © 2022 Elsevier B.V.

关键词Brain Decoding Diagnosis Magnetic resonance imaging Signal encoding Tumors Brain tumors Common feature learning Common features Context-Aware Diagnosis planning Feature learning Feature space Image modality Images synthesis Multi-modal
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收录类别SCI ; SCIE ; EI
语种英语
资助项目National Natural Science Foundation of China[61971271,62131015] ; Taishan Scholars Project of Shandong Province[Tsqn20161023] ; Jinan City-School Integration Development Strategy Project[JNSX2021023]
WOS研究方向Computer Science ; Engineering ; Radiology, Nuclear Medicine & Medical Imaging
WOS类目Computer Science, Artificial Intelligence ; Computer Science, Interdisciplinary Applications ; Engineering, Biomedical ; Radiology, Nuclear Medicine & Medical Imaging
WOS记录号WOS:000805189000001
出版者Elsevier B.V.
EI入藏号20222012108776
EI主题词Generative adversarial networks
EI分类号461.1 Biomedical Engineering ; 461.2 Biological Materials and Tissue Engineering ; 461.6 Medicine and Pharmacology ; 701.2 Magnetism: Basic Concepts and Phenomena ; 716.1 Information Theory and Signal Processing ; 723.2 Data Processing and Image Processing ; 723.4 Artificial Intelligence ; 746 Imaging Techniques
原始文献类型Journal article (JA)
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/183406
专题生物医学工程学院_PI研究组_王乾组
生物医学工程学院_PI研究组_沈定刚组
生物医学工程学院_PI研究组_张寒组
通讯作者Li, Dengwang; Wang, Qian; Zhang, Han; Shen, Dinggang
作者单位
1.Shandong Normal Univ, Shandong Inst Ind Technol Hlth Sci, Precis Med Sch Phys & Elect, Shandong Key Lab Med Phys & Image Proc, Jinan 250358, Shandong, Peoples R China
2.Warren Alpert Med Sch Brown Univ, Dept Radiol, Providence, RI USA
3.Shanghai Jiao Tong Univ, Inst Med Imaging Technol, Sch Biomed Engn, Shanghai 200030, Peoples R China
4.Tianjin Univ, Coll Intelligence & Comp, Tianjin, Peoples R China
5.China Japan Union Hosp Jilin Univ, Dept Radiol, Changchun 130033, Peoples R China
6.ShanghaiTech Univ, Sch Biomed Engn, Shanghai 201210, Peoples R China
7.Shanghai United Imaging Intelligence Co Ltd, Dept Res & Dev, Shanghai, Peoples R China
通讯作者单位生物医学工程学院
推荐引用方式
GB/T 7714
Huang, Pu,Li, Dengwang,Jiao, Zhicheng,et al. Common feature learning for brain tumor MRI synthesis by context-aware generative adversarial network[J]. MEDICAL IMAGE ANALYSIS,2022,79.
APA Huang, Pu.,Li, Dengwang.,Jiao, Zhicheng.,Wei, Dongming.,Cao, Bing.,...&Shen, Dinggang.(2022).Common feature learning for brain tumor MRI synthesis by context-aware generative adversarial network.MEDICAL IMAGE ANALYSIS,79.
MLA Huang, Pu,et al."Common feature learning for brain tumor MRI synthesis by context-aware generative adversarial network".MEDICAL IMAGE ANALYSIS 79(2022).
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