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Proximal single-stranded RNA destabilizes human telomerase RNA G-quadruplex and induces its distinct conformers
2021-04-08
发表期刊THE JOURNAL OF PHYSICAL CHEMISTRY LETTERS (IF:4.8[JCR-2023],5.3[5-Year])
ISSN1948-7185
卷号12期号:13页码:3361-3366
发表状态已发表
DOI10.1021/acs.jpclett.1c00250
摘要

Single-stranded guanine-rich RNA sequences have a propensity to fold into compact G-quadruplexes (RG4s). The conformational transitions of these molecules provide an important way to regulate their biological functions. Here, we examined the stability and conformation of an RG4-forming sequence identified near the end of human telomerase RNA. We found that a proximal single-stranded (ss) RNA significantly impairs RG4 stability at physiological K+ concentrations, resulting in a reduced RG4 rupture force of similar to 24.4 pN and easier accessibility of the G-rich sequence. The destabilizing effect requires a minimum of six nucleotides of ssRNA and is effective at either end of RG4. Remarkably, this RG4-forming sequence, under the influence of such a proximal ssRNA, exhibits interconversions between at least three less stable RG4 conformers that might represent potential intermediates along its folding/unfolding pathway. This work provides insights into the stability and folding dynamics of RG4 that are essential for understanding its biological functions.

收录类别SCIE ; EI
语种英语
WOS研究方向Chemistry ; Science & Technology - Other Topics ; Materials Science ; Physics
WOS类目Chemistry, Physical ; Nanoscience & Nanotechnology ; Materials Science, Multidisciplinary ; Physics, Atomic, Molecular & Chemical
WOS记录号WOS:000639041200015
出版者AMER CHEMICAL SOC
原始文献类型Article
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/126707
专题生命科学与技术学院_公共科研平台_分子细胞学平台
生命科学与技术学院_PI研究组_孙博组
生命科学与技术学院_公共科研平台_高性能计算平台
生命科学与技术学院_博士生
共同第一作者Chen, Ziting
通讯作者Sun, Bo
作者单位
1.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China;
2.Chinese Acad Sci, Ctr Excellence Mol Cell Sci, Shanghai Inst Biochem & Cell Biol, Shanghai 200031, Peoples R China;
3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China;
4.Nanjing Med Univ, Ctr Global Hlth, State Key Lab Reprod Med, Nanjing 211166, Peoples R China;
5.Northwest A&F Univ, Coll Life Sci, Yangling 712100, Shaanxi, Peoples R China;
6.Henan Univ, Sch Life Sci, Key Lab Plant Stress Biol, Kaifeng 475001, Peoples R China;
7.Chinese Acad Sci, Interdisciplinary Res Ctr Biol & Chem, Shanghai Inst Organ Chem, Shanghai 201210, Peoples R China
第一作者单位生命科学与技术学院
通讯作者单位生命科学与技术学院
第一作者的第一单位生命科学与技术学院
推荐引用方式
GB/T 7714
Ye, Shasha,Chen, Ziting,Zhang, Xia,et al. Proximal single-stranded RNA destabilizes human telomerase RNA G-quadruplex and induces its distinct conformers[J]. THE JOURNAL OF PHYSICAL CHEMISTRY LETTERS,2021,12(13):3361-3366.
APA Ye, Shasha.,Chen, Ziting.,Zhang, Xia.,Li, Fangfang.,Guo, Lijuan.,...&Sun, Bo.(2021).Proximal single-stranded RNA destabilizes human telomerase RNA G-quadruplex and induces its distinct conformers.THE JOURNAL OF PHYSICAL CHEMISTRY LETTERS,12(13),3361-3366.
MLA Ye, Shasha,et al."Proximal single-stranded RNA destabilizes human telomerase RNA G-quadruplex and induces its distinct conformers".THE JOURNAL OF PHYSICAL CHEMISTRY LETTERS 12.13(2021):3361-3366.
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