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A Cas-embedding strategy for minimizing off-target effects of DNA base editors
2020-12-27
发表期刊NATURE COMMUNICATIONS (IF:14.7[JCR-2023],16.1[5-Year])
ISSN2041-1723
卷号11期号:1
发表状态已发表
DOI10.1038/s41467-020-19690-0
摘要

DNA base editors, typically comprising editing enzymes fused to the N-terminus of nCas9, display off-target effects on DNA and/or RNA, which have remained an obstacle to their clinical applications. Off-target edits are typically countered via rationally designed point mutations, but the approach is tedious and not always effective. Here, we report that the off-target effects of both A>G and C>T editors can be dramatically reduced without compromising the on-target editing simply by inserting the editing enzymes into the middle of nCas9 at tolerant sites identified using a transposon-based genetic screen. Furthermore, employing this Cas-embedding strategy, we have created a highly specific editor capable of efficient C>T editing at methylated and GC-rich sequences.

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收录类别SCI ; SCIE
资助项目National Key RD Program[2016YFA0500903] ; National Science Foundation of China[81830004]
WOS研究方向Science & Technology - Other Topics
WOS类目Multidisciplinary Sciences
WOS记录号WOS:000596477700003
出版者NATURE RESEARCH
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文献类型期刊论文
条目标识符https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/124694
专题生命科学与技术学院_PI研究组_黄行许组
生命科学与技术学院_PI研究组_池天组
生命科学与技术学院_硕士生
生命科学与技术学院_博士生
共同第一作者Zhou, Changyang; Huang, Shisheng; Dang, Lu; Wei, Yu
通讯作者Yang, Hui; Huang, Xingxu; Chi, Tian
作者单位
1.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai, Peoples R China
2.Chinese Acad Sci, Inst Neurosci,Shanghai Inst Biol Sci, State Key Lab Neurosci,Shanghai Res Ctr Brain Sci, Key Lab Primate Neurobiol,CAS Ctr Excellence Brai, Shanghai, Peoples R China
3.Univ Chinese Acad Sci, Beijing, Peoples R China
4.Guangzhou Med Univ, Canc Hosp & Inst, Guangzhou, Peoples R China
第一作者单位生命科学与技术学院
通讯作者单位生命科学与技术学院
第一作者的第一单位生命科学与技术学院
推荐引用方式
GB/T 7714
Liu, Yajing,Zhou, Changyang,Huang, Shisheng,et al. A Cas-embedding strategy for minimizing off-target effects of DNA base editors[J]. NATURE COMMUNICATIONS,2020,11(1).
APA Liu, Yajing.,Zhou, Changyang.,Huang, Shisheng.,Dang, Lu.,Wei, Yu.,...&Chi, Tian.(2020).A Cas-embedding strategy for minimizing off-target effects of DNA base editors.NATURE COMMUNICATIONS,11(1).
MLA Liu, Yajing,et al."A Cas-embedding strategy for minimizing off-target effects of DNA base editors".NATURE COMMUNICATIONS 11.1(2020).
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