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ShanghaiTech University Knowledge Management System
REPAIRx, a specific yet highly efficient programmable A > I RNA base editor | |
2020-11-16 | |
发表期刊 | EMBO JOURNAL (IF:9.4[JCR-2023],11.0[5-Year]) |
ISSN | 0261-4189 |
EISSN | 1460-2075 |
发表状态 | 已发表 |
DOI | 10.15252/embj.2020104748 |
摘要 | Programmable A > I RNA editing is a valuable tool for basic research and medicine. A variety of editors have been created, but a genetically encoded editor that is both precise and efficient has not been described to date. The trade-off between precision and efficiency is exemplified in the state of the art editor REPAIR, which comprises the ADAR2 deaminase domain fused to dCas13b. REPAIR is highly efficient, but also causes significant off-target effects. Mutations that weaken the deaminase domain can minimize the undesirable effects, but this comes at the expense of on-target editing efficiency. We have now overcome this dilemma by using a multipronged approach: We have chosen an alternative Cas protein (CasRx), inserted the deaminase domain into the middle of CasRx, and redirected the editor to the nucleus. The new editor created, dubbed REPAIRx, is precise yet highly efficient, outperforming various previous versions on both mRNA and nuclear RNA targets. Thus, REPAIRx markedly expands the RNA editing toolkit and illustrates a novel strategy for base editor optimization. |
关键词 | base editing CasRx programmable RNA |
收录类别 | SCI ; SCIE |
资助项目 | National Natural Science Foundation of China[81870307] ; University Special Innovative Research Program of Department of Education of Guangdong Province[2017KTSCX189] |
WOS研究方向 | Biochemistry & Molecular Biology ; Cell Biology |
WOS类目 | Biochemistry & Molecular Biology ; Cell Biology |
WOS记录号 | WOS:000577754600001 |
出版者 | WILEY |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | https://kms.shanghaitech.edu.cn/handle/2MSLDSTB/123489 |
专题 | 生命科学与技术学院_硕士生 生命科学与技术学院_PI研究组_池天组 生命科学与技术学院_PI研究组_黄行许组 生命科学与技术学院_博士生 |
共同第一作者 | Mao, Shaoshuai; Huang, Shisheng |
通讯作者 | Chi, Tian |
作者单位 | 1.ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai, Peoples R China; 2.Univ Chinese Acad Sci, Beijing, Peoples R China; 3.Chinese Acad Sci, Shanghai Inst Biol Sci, Shanghai, Peoples R China; 4.Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Shanghai, Peoples R China; 5.Foshan Univ, Sch Stomatol & Med, Dept Basic Med & Biomed Engn, Foshan, Peoples R China; 6.Yale Univ, Sch Med, Dept Immunobiol, New Haven, CT 06519 USA |
第一作者单位 | 生命科学与技术学院 |
通讯作者单位 | 生命科学与技术学院 |
第一作者的第一单位 | 生命科学与技术学院 |
推荐引用方式 GB/T 7714 | Liu, Yajing,Mao, Shaoshuai,Huang, Shisheng,et al. REPAIRx, a specific yet highly efficient programmable A > I RNA base editor[J]. EMBO JOURNAL,2020. |
APA | Liu, Yajing.,Mao, Shaoshuai.,Huang, Shisheng.,Li, Yongqin.,Chen, Yuxin.,...&Chi, Tian.(2020).REPAIRx, a specific yet highly efficient programmable A > I RNA base editor.EMBO JOURNAL. |
MLA | Liu, Yajing,et al."REPAIRx, a specific yet highly efficient programmable A > I RNA base editor".EMBO JOURNAL (2020). |
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